RPSBLAST alignment of GI: 254780636 and protein with PDBid: 1yt3

>1yt3_A Ribonuclease D, RNAse D; exoribonuclease, exonuclease, hydrolase, tRNA processing, hydrolase,translation; 1.60A {Escherichia coli} SCOP: a.60.8.3 a.60.8.3 c.55.3.5 Length = 375

 Score = 87.7 bits (216), Expect = 2e-18
 Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 3/171 (1%)

Query: 21  DAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGMLVDEKREKIFH 80
            AIA+DTE +       +L ++QL  G+    I  +     +   L  +L D    K  H
Sbjct: 23  PAIALDTEFVRTRTYYPQLGLIQLFDGEHLALIDPLG--ITDWSPLKAILRDPSITKFLH 80

Query: 81  YGRFDIAVLFYTFGVRVRPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSDW 140
            G  D+ V    FG   +P+  T+I +          G    ++E  G+ + K++  +DW
Sbjct: 81  AGSEDLEVFLNVFGELPQPLIDTQILAAFCG-RPMSWGFASMVEEYSGVTLDKSESRTDW 139

Query: 141 SADDLSDEQLQYAASDVVHLHALRLQFTEKLQRLGRSDLATSCCNFLMDRA 191
            A  L++ Q +YAA+DV +L  +  +   + +  G    A   C  +  R 
Sbjct: 140 LARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECRLMQMRR 190