RPSBLAST alignment of GI: 254780636 and SCOP domain: d1yt3a3

Alignment

 Score = 87.3 bits (215), Expect = 9e-19
 Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 3/170 (1%)

Query: 21  DAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGMLVDEKREKIFH 80
            AIA+DTE +       +L ++Q    DG    +    G  +   L  +L D    K  H
Sbjct: 23  PAIALDTEFVRTRTYYPQLGLIQ--LFDGEHLALIDPLGITDWSPLKAILRDPSITKFLH 80

Query: 81  YGRFDIAVLFYTFGVRVRPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSDW 140
            G  D+ V    FG   +P+  T+I +          G    ++E  G+ + K++  +DW
Sbjct: 81  AGSEDLEVFLNVFGELPQPLIDTQILAA-FCGRPMSWGFASMVEEYSGVTLDKSESRTDW 139

Query: 141 SADDLSDEQLQYAASDVVHLHALRLQFTEKLQRLGRSDLATSCCNFLMDR 190
            A  L++ Q +YAA+DV +L  +  +   + +  G    A   C  +  R
Sbjct: 140 LARPLTERQCEYAAADVWYLLPITAKLMVETEASGWLPAALDECRLMQMR 189

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: DnaQ-like 3'-5' exonuclease
domain: Ribonuclease D, catalytic domain
species: Escherichia coli [TaxId: 562]