HHsearch alignment for GI: 254780638 and conserved domain: TIGR02642

>TIGR02642 phage_xxxx uncharacterized phage protein; InterPro: IPR013464 This uncharacterised protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus (strain YJ016), Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to the phage lambda antitermination protein Q..
Probab=93.82  E-value=0.017  Score=38.53  Aligned_cols=44  Identities=11%  Similarity=0.066  Sum_probs=20.4

Q ss_pred             CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCH
Q ss_conf             99999999999999975699887987999999999998760998
Q gi|254780638|r   17 TDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP   60 (384)
Q Consensus        17 s~~eIKkAYrklA~k~HPDkn~~d~~A~ekFkeI~eAYevLsD~   60 (384)
T Consensus        61 D~~A~~~L~~~~~~~~~~~~~~G~~~~~l~~l~l~~~L~r~~~~  104 (270)
T TIGR02642        61 DVEAIQKLLAHICEQLEVSIAPGVAAAALAKLALNEVLERLVDA  104 (270)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf             88999999998524556676626899999850006771775311