HHsearch alignment for GI: 254780638 and conserved domain: pfam00684
>pfam00684 DnaJ_CXXCXGXG DnaJ central domain (4 repeats). The central cysteine-rich (CR) domain of DnaJ proteins contains four repeats of the motif CXXCXGXG where X is any amino acid. The isolated cysteine rich domain folds in zinc dependent fashion. Each set of two repeats binds one unit of zinc. Although this domain has been implicated in substrate binding, no evidence of specific interaction between the isolated DNAJ cysteine rich domain and various hydrophobic peptides has been found.
Probab=92.91 E-value=0.069 Score=34.09 Aligned_cols=47 Identities=30% Similarity=0.839 Sum_probs=30.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEE------------CCCCCCCCCCEEC
Q ss_conf 5421035531011210011001246861666565546983------------5412001121000
Q gi|254780638|r 166 TNPMDCNICNGSGRVYTTAQSFFSIERACSTCRGSGQIIP------------HPCSKCHGQGRVS 218 (384)
Q Consensus 166 ~~~~~C~~C~G~G~~~~~~~~~~~~~~~C~~C~G~g~i~~------------~~c~~C~G~g~~~ 218 (384)
T Consensus 9 ~r~~~C~~C~G~G~~~~------~~~~~C~~C~G~G~~~~~~~~~~~~~~~~~~C~~C~G~G~~i 67 (79)
T pfam00684 9 SRKVTCPHCHGTGAKPG------KKPKTCPTCNGSGVVVRVQRTPGGVFQFQQTCPACGGTGKII 67 (79)
T ss_pred EECCCCCCCCCEEECCC------CCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCEEEEE
T ss_conf 54568899966040899------988689898887799999957983588688996688646188