HHsearch alignment for GI: 254780638 and conserved domain: pfam01556
>pfam01556 DnaJ_C DnaJ C terminal region. This family consists of the C terminal region form the DnaJ protein. Although the function of this region is unknown, it is always found associated with pfam00226 and pfam00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress.
Probab=97.42 E-value=0.00016 Score=53.09 Aligned_cols=77 Identities=32% Similarity=0.511 Sum_probs=57.9
Q ss_pred CCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC
Q ss_conf 21222221123222100000135544455443100023432257885421035531011210011001246861666565
Q gi|254780638|r 120 TGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSGRVYTTAQSFFSIERACSTCRG 199 (384)
Q Consensus 120 ~~~~~~d~~~~~~islee~~~G~~~~i~~~~~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~C~~C~G 199 (384)
T Consensus 15 f~r~G~dL~~~~~I~~~~al~G~~~~i~~l-------------------------------------------------- 44 (101)
T pfam01556 15 FKRDGNDLYVTLPISLKEALLGGTVEVPTL-------------------------------------------------- 44 (101)
T ss_pred EEEECCEEEEEECCCHHHHHCCCCEEECCC--------------------------------------------------
T ss_conf 899799899996589899725882564258--------------------------------------------------
Q ss_pred CCEEEECCCCCCCCCCEECCCCCCCHHHHHCCCCCCCEEECCCCCCCCC-CCCCCCEEEEEECCCCC
Q ss_conf 5469835412001121000111000001100114850120367765678-84166415753103468
Q gi|254780638|r 200 SGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIRLSGEGGAGVY-GGAPGDLYIFISVKKHQ 265 (384)
Q Consensus 200 ~g~i~~~~c~~C~G~g~~~~~~~~~I~Ip~G~~~G~~i~~~g~G~~~~~-~~~~GDl~i~i~~~~h~ 265 (384)
T Consensus 45 -------------------dG~~i~i~ip~~~~~g~~~~i~g~Gmp~~~~~~~~GdL~i~~~v~~P~ 92 (101)
T pfam01556 45 -------------------DGRKLKIKIPAGTQPGDVLRIKGKGMPIFKGSGGRGDLIVTFNVKIPK 92 (101)
T ss_pred -------------------CCCEEEEECCCEECCCCEEEECCCCCCCCCCCCCCCCEEEEEEEECCC
T ss_conf -------------------996778710990258968986798786079999846899999999799