HHsearch results for GI: 254780638 and protein with PDBid: 3lz8_A

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein structure initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00  E-value=0  Score=547.38  Aligned_cols=303  Identities=33%  Similarity=0.596  Sum_probs=246.1

Q ss_pred             CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             98745248718799889999999999999997569988798799999999999876099899999877248765314555
Q gi|254780638|r    1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKRALYDQGGHEALEYGAQS   80 (384)
Q Consensus         1 ~~~~DyY~iLGV~~~As~~eIKkAYrklA~k~HPDkn~~d~~A~ekFkeI~eAYevLsD~~kR~~YD~~G~~~~~~~~~~   80 (384)
                      |+.+|||+||||+++||++||||||||||+|||||||+ +++|++|||+|+|||||||||+||++||++|..+...+...
T Consensus        25 m~~kDyY~iLGV~~~AS~~EIKkAYRkLA~k~HPDkn~-~~~AeekFkeI~eAYevLsD~~kR~~YD~~g~~~~~~~~~~  103 (329)
T 3lz8_A           25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGR  103 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf             66477789809999979999999999999986889897-94699999999999972103445555666653035877675


Q ss_pred             CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEECCCCCC
Q ss_conf             66521001443222222334443561013760344422221222221123222100000135544455443100023432
Q gi|254780638|r   81 QGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSSSTGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGS  160 (384)
Q Consensus        81 ~~~~~~~~~~~~~~~~~d~f~~~f~~~~~~~~~~~~~~~~~~~~~d~~~~~~islee~~~G~~~~i~~~~~~~C~~C~G~  160 (384)
                      ..  .+..+.....++.++|..+|+.....     .......++.++...+.+++++.+.|....+.+..          
T Consensus       104 ~~--~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~----------  166 (329)
T 3lz8_A          104 QR--QTHEQSYSQQDFDDIFSSMFGQQAHQ-----RRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNL----------  166 (329)
T ss_dssp             ----------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEE----------
T ss_pred             CC--CCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC----------
T ss_conf             45--65677667888544330304676555-----55566667887033112221101245532222124----------


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCEECCCCCCCHHHHHCCCCCCCEEEC
Q ss_conf             25788542103553101121001100124686166656554698354120011210001110000011001148501203
Q gi|254780638|r  161 GAKPGTNPMDCNICNGSGRVYTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIRLS  240 (384)
Q Consensus       161 g~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~C~~C~G~g~i~~~~c~~C~G~g~~~~~~~~~I~Ip~G~~~G~~i~~~  240 (384)
                                                                    .|..|.+.+...+.++++|.||||+.+|++|+++
T Consensus       167 ----------------------------------------------~~~~~~~~~~~~~~~~~~v~ip~G~~~G~~i~~~  200 (329)
T 3lz8_A          167 ----------------------------------------------PVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLK  200 (329)
T ss_dssp             ----------------------------------------------EECCSCC-CCEEEEEEEEEEECTTCCTTCEEEES
T ss_pred             ----------------------------------------------CCCCCCCCEEECCCCEECCCCCCCCCCCEEEEEC
T ss_conf             ----------------------------------------------6534467312026743788679898598289989


Q ss_pred             CCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEEEECHHHHCCCCEEEEECCCCCCCCEEECCCCCCCCEEEECCE
Q ss_conf             67765678841664157531034684286414846999846665135424885167888231011685177887898881
Q gi|254780638|r  241 GEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDATHSRVTIPEGTQTGKQFRLKGK  320 (384)
Q Consensus       241 g~G~~~~~~~~~GDl~i~i~~~~h~~f~r~g~dL~~~~~I~l~eal~G~~~~i~tldG~~i~i~i~~~~~~~~~~~i~g~  320 (384)
                      |+|++.+.+..+|||+|+|.+++|+.|+|+|+||+++++|++++||+|+++.|+||+|. +.|+||++++||++++|+|+
T Consensus       201 g~G~~~~~~~~~GDl~i~i~~~~~~~f~R~g~dL~~~~~I~l~eAl~G~~~~i~tldg~-~~v~ip~g~~~G~~~ri~Gk  279 (329)
T 3lz8_A          201 GQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGK  279 (329)
T ss_dssp             SCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTC
T ss_pred             CEECCCCCCCCCCCEEEEEEEECCCCCEECCCCEEEEEEECCHHHCCCCCEEEECCCCC-EEEEECCCCCCCCEEEECCC
T ss_conf             70335878887875799999824775232277337888866322036993176678987-89987989899968998898


Q ss_pred             ECCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH
Q ss_conf             0200689886527999999929899999999999999872888881005889
Q gi|254780638|r  321 GMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFEQISSQDNNPQSTGFF  372 (384)
Q Consensus       321 G~p~~~~~~rGdl~i~~~v~~P~~Ls~~qk~ll~~l~~~~~~~~~~~~~~~~  372 (384)
                      |||.  .+.||||||+|+|+||++||++||+||++|+++.. ..+|++ +||
T Consensus       280 G~p~--~~~rGDL~V~~~V~~P~~ls~~qkell~~l~~~~~-~~~p~~-~~~  327 (329)
T 3lz8_A          280 GLVS--KTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAEA-SFDPRK-TWG  327 (329)
T ss_dssp             SCBC--SSCBCCEEEEEEECCCSSCCHHHHHHHHHHHHHTT-TCCTTT-TC-
T ss_pred             CCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCC-CCCCHH-HHC
T ss_conf             9899--99988989999998699999999999999985136-899414-321