HHsearch results for GI: 254780638 and protein with PDBid: 3lz8_A
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein structure initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=0 Score=547.38 Aligned_cols=303 Identities=33% Similarity=0.596 Sum_probs=246.1
Q ss_pred CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 98745248718799889999999999999997569988798799999999999876099899999877248765314555
Q gi|254780638|r 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKRALYDQGGHEALEYGAQS 80 (384)
Q Consensus 1 ~~~~DyY~iLGV~~~As~~eIKkAYrklA~k~HPDkn~~d~~A~ekFkeI~eAYevLsD~~kR~~YD~~G~~~~~~~~~~ 80 (384)
|+.+|||+||||+++||++||||||||||+|||||||+ +++|++|||+|+|||||||||+||++||++|..+...+...
T Consensus 25 m~~kDyY~iLGV~~~AS~~EIKkAYRkLA~k~HPDkn~-~~~AeekFkeI~eAYevLsD~~kR~~YD~~g~~~~~~~~~~ 103 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSK-ENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGR 103 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf 66477789809999979999999999999986889897-94699999999999972103445555666653035877675
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEECCCCCC
Q ss_conf 66521001443222222334443561013760344422221222221123222100000135544455443100023432
Q gi|254780638|r 81 QGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSSSTGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGS 160 (384)
Q Consensus 81 ~~~~~~~~~~~~~~~~~d~f~~~f~~~~~~~~~~~~~~~~~~~~~d~~~~~~islee~~~G~~~~i~~~~~~~C~~C~G~ 160 (384)
.. .+..+.....++.++|..+|+..... .......++.++...+.+++++.+.|....+.+..
T Consensus 104 ~~--~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~---------- 166 (329)
T 3lz8_A 104 QR--QTHEQSYSQQDFDDIFSSMFGQQAHQ-----RRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNL---------- 166 (329)
T ss_dssp ----------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEE----------
T ss_pred CC--CCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC----------
T ss_conf 45--65677667888544330304676555-----55566667887033112221101245532222124----------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCCEECCCCCCCHHHHHCCCCCCCEEEC
Q ss_conf 25788542103553101121001100124686166656554698354120011210001110000011001148501203
Q gi|254780638|r 161 GAKPGTNPMDCNICNGSGRVYTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIRLS 240 (384)
Q Consensus 161 g~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~~C~~C~G~g~i~~~~c~~C~G~g~~~~~~~~~I~Ip~G~~~G~~i~~~ 240 (384)
.|..|.+.+...+.++++|.||||+.+|++|+++
T Consensus 167 ----------------------------------------------~~~~~~~~~~~~~~~~~~v~ip~G~~~G~~i~~~ 200 (329)
T 3lz8_A 167 ----------------------------------------------PVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLK 200 (329)
T ss_dssp ----------------------------------------------EECCSCC-CCEEEEEEEEEEECTTCCTTCEEEES
T ss_pred ----------------------------------------------CCCCCCCCEEECCCCEECCCCCCCCCCCEEEEEC
T ss_conf ----------------------------------------------6534467312026743788679898598289989
Q ss_pred CCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCEEEEEECHHHHCCCCEEEEECCCCCCCCEEECCCCCCCCEEEECCE
Q ss_conf 67765678841664157531034684286414846999846665135424885167888231011685177887898881
Q gi|254780638|r 241 GEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDATHSRVTIPEGTQTGKQFRLKGK 320 (384)
Q Consensus 241 g~G~~~~~~~~~GDl~i~i~~~~h~~f~r~g~dL~~~~~I~l~eal~G~~~~i~tldG~~i~i~i~~~~~~~~~~~i~g~ 320 (384)
|+|++.+.+..+|||+|+|.+++|+.|+|+|+||+++++|++++||+|+++.|+||+|. +.|+||++++||++++|+|+
T Consensus 201 g~G~~~~~~~~~GDl~i~i~~~~~~~f~R~g~dL~~~~~I~l~eAl~G~~~~i~tldg~-~~v~ip~g~~~G~~~ri~Gk 279 (329)
T 3lz8_A 201 GQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGK 279 (329)
T ss_dssp SCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTC
T ss_pred CEECCCCCCCCCCCEEEEEEEECCCCCEECCCCEEEEEEECCHHHCCCCCEEEECCCCC-EEEEECCCCCCCCEEEECCC
T ss_conf 70335878887875799999824775232277337888866322036993176678987-89987989899968998898
Q ss_pred ECCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHH
Q ss_conf 0200689886527999999929899999999999999872888881005889
Q gi|254780638|r 321 GMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFEQISSQDNNPQSTGFF 372 (384)
Q Consensus 321 G~p~~~~~~rGdl~i~~~v~~P~~Ls~~qk~ll~~l~~~~~~~~~~~~~~~~ 372 (384)
|||. .+.||||||+|+|+||++||++||+||++|+++.. ..+|++ +||
T Consensus 280 G~p~--~~~rGDL~V~~~V~~P~~ls~~qkell~~l~~~~~-~~~p~~-~~~ 327 (329)
T 3lz8_A 280 GLVS--KTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAEA-SFDPRK-TWG 327 (329)
T ss_dssp SCBC--SSCBCCEEEEEEECCCSSCCHHHHHHHHHHHHHTT-TCCTTT-TC-
T ss_pred CCCC--CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCC-CCCCHH-HHC
T ss_conf 9899--99988989999998699999999999999985136-899414-321