RPSBLAST alignment for GI: 254780638 and conserved domain: TIGR03835

>gnl|CDD|163547 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. Length = 871
 Score = 41.3 bits (96), Expect = 5e-04
 Identities = 34/145 (23%), Positives = 52/145 (35%), Gaps = 20/145 (13%)

Query: 243 GGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDATHSR 302
           G    +G   GDL +   V    FF+     L+    +  +    GG  DV   +     
Sbjct: 717 GFGHDFGNGCGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPN-KLFN 775

Query: 303 VTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQV--------------QVETPQKLNKR 348
           V IP G +   Q   K  G+       KG L V +              QV+   KL  R
Sbjct: 776 VRIPGGIKVNDQVIFKDLGL-TKTKYDKGSLIVHLYYSSVMKKNDRTNVQVQQFNKLALR 834

Query: 349 QRELL----EEFEQISSQDNNPQST 369
           + +LL    +E +   S  +N + +
Sbjct: 835 EYKLLKYNQKELQNFQSNLSNGKKS 859