RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780638|ref|YP_003065051.1| molecular chaperone protein DnaJ [Candidatus Liberibacter asiaticus str. psy62] (384 letters) >gnl|CDD|182712 PRK10767, PRK10767, chaperone protein DnaJ; Provisional. Length = 371 Score = 604 bits (1560), Expect = e-173 Identities = 220/382 (57%), Positives = 266/382 (69%), Gaps = 13/382 (3%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 M K D+Y+VLG+ RNA++ ++K A+R LAMKYHPD+N D EA+EKF +I EAYEVL DP Sbjct: 1 MAKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDP 60 Query: 61 QKRALYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSSST 120 QKRA YDQ GH A E G G GGFG G F ++F IFG I G GR Sbjct: 61 QKRAAYDQYGHAAFEQGG---GGGGFG----GGGGFGDIFGDIFGDIFGGGRG--GGRQR 111 Query: 121 GEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSGRV 180 GADLRYN+EI+LEEA G T +IR PT V C TC GSGAKPGT+P C C+G+G+V Sbjct: 112 ARRGADLRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQV 171 Query: 181 YTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIRLS 240 Q FF++++ C TC G G+II PC KCHGQGRV +EK LSV +P GVD G RIRLS Sbjct: 172 -RMQQGFFTVQQTCPTCHGRGKIIKDPCKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLS 230 Query: 241 GEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDATH 300 GEG AG GG GDLY+ I VK+H F+RDG DLYC VPIS T A+GG +V TLD Sbjct: 231 GEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAALGGEIEVPTLDG-R 289 Query: 301 SRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFEQI- 359 ++ IPEGTQTGK FRL+GKG+ + SG +GDLY QV VETP L KRQ+ELLEEFE+ Sbjct: 290 VKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQVVVETPVNLTKRQKELLEEFEESF 349 Query: 360 -SSQDNNPQSTGFFARMKDFFD 380 S + ++P+S GFF ++KDFFD Sbjct: 350 ESGEKHSPKSKGFFDKVKDFFD 371 >gnl|CDD|162815 TIGR02349, DnaJ_bact, chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354 Score = 464 bits (1197), Expect = e-131 Identities = 175/359 (48%), Positives = 230/359 (64%), Gaps = 8/359 (2%) Query: 5 DFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKRA 64 D+Y++LG+ ++A++ ++K A+R LA KYHPD+N+ D EA+EKF +I+EAYEVL DP+KRA Sbjct: 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNK-DKEAEEKFKEINEAYEVLSDPEKRA 59 Query: 65 LYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSSSTGEAG 124 YDQ GH G G G G + DF ++F FGG GSGR R S G Sbjct: 60 QYDQFGHAGFNGGGGGGGGGFNGFDIGFFGDFGDIFGDFFGGGGGSGR---RRRSGPRRG 116 Query: 125 ADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSGRVYTTA 184 DLRY+LE++ EEA G +I P C TC G+GAKPGT+P C C G+G+V Sbjct: 117 EDLRYDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQ 176 Query: 185 QS---FFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIRLSG 241 + FF ++ C TC G G+II PCS C G+GRV E K ++V +P GVD G R+R+SG Sbjct: 177 GTPFGFFQQQQTCPTCGGEGKIIKEPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSG 236 Query: 242 EGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDATHS 301 +G AG GG GDLY+ I VK H+ F+RDG DLY VPIS +GG +V TLD Sbjct: 237 KGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQAILGGEIEVPTLDGD-V 295 Query: 302 RVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFEQIS 360 ++ IP GTQ+G FRLKGKG+P + +GDL V V+VETP+ L+K Q+ELLEE + S Sbjct: 296 KLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVTVKVETPKNLSKEQKELLEELAEAS 354 >gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional. Length = 386 Score = 399 bits (1026), Expect = e-112 Identities = 181/387 (46%), Positives = 245/387 (63%), Gaps = 11/387 (2%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 K D+Y++LG+DRNAT+ ++K A+R LA KYHPD N D EA++KF +I+EAYE+L DP Sbjct: 2 AAKKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDP 61 Query: 61 QKRALYDQGGHEALEYGAQSQG---AGGFGAGM--YGNSDFSELFEGIFGGIMGSGRSYK 115 QKRA YDQ GH A + G QG GGFG G + F ++FE IFG G+GR Sbjct: 62 QKRAQYDQFGHAAFDPGGFGQGGFGQGGFGGGGFDFDFGGFGDIFEDIFGDFFGTGRRRA 121 Query: 116 RSSSTGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICN 175 + + GAD+RY+LE++ EEA G +I KC C GSGAKPG+ P+ C +C+ Sbjct: 122 ETGP--QKGADIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCH 179 Query: 176 GSGRVYTTAQSFFS---IERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVD 232 G+G+V T + F R C C G G+II PC+KC G GR+ + + VN+P G+D Sbjct: 180 GTGQVRTRQNTPFGRIVNIRTCDRCHGEGKIITDPCNKCGGTGRIRRRRKIKVNIPAGID 239 Query: 233 DGTRIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFD 292 DG I L GEG G+ GG GDLYI I VK H FKR+G ++Y +PI+ A+GG + Sbjct: 240 DGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITFTDAALGGEIE 299 Query: 293 VATLDATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQREL 352 + TLD + TIPEGTQTG +FRL+GKG+P + +GD V+V +E P+KL ++Q+EL Sbjct: 300 IPTLDGK-VKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVKVYIEVPKKLTEKQKEL 358 Query: 353 LEEFEQISSQDNNPQSTGFFARMKDFF 379 L EFE++S ++ FF RMKD F Sbjct: 359 LREFEKLSGEEGTESRKSFFQRMKDAF 385 >gnl|CDD|184602 PRK14280, PRK14280, chaperone protein DnaJ; Provisional. Length = 376 Score = 394 bits (1014), Expect = e-110 Identities = 173/384 (45%), Positives = 233/384 (60%), Gaps = 16/384 (4%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 M K D+Y+VLG+ ++A+ ++K A+R L+ KYHPD N+ + A EKF +ISEAYEVL D Sbjct: 1 MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINK-EEGADEKFKEISEAYEVLSDD 59 Query: 61 QKRALYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSEL--FEGIFGGIMGSGRSYKRSS 118 QKRA YDQ GH G GFG G +G DF FE IF G G +R Sbjct: 60 QKRAQYDQFGHA----GPN----QGFGGGGFGGGDFGGGFGFEDIFSSFFGGG-GRRRDP 110 Query: 119 STGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSG 178 + GADL+Y + ++ EEA GK +I P C TC GSGAKPGT+ C+ C GSG Sbjct: 111 NAPRQGADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSG 170 Query: 179 RVYTTAQSFFS---IERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGT 235 +V + F + C C G+GQ I C CHG+G+V + K ++V +P GVD+G Sbjct: 171 QVSVEQNTPFGRVVNRQTCPHCNGTGQEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQ 230 Query: 236 RIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVAT 295 +IR+SGEG GV GG GDLY+ V+ H+FF+RDG D+YC +P++ A+G +V T Sbjct: 231 QIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLTFAQAALGDEIEVPT 290 Query: 296 LDATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEE 355 L ++ IP GTQTG QFRLKGKG+P + +GD YV V+V TP KL RQ+ELL E Sbjct: 291 LHG-KVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVVVRVVTPTKLTDRQKELLRE 349 Query: 356 FEQISSQDNNPQSTGFFARMKDFF 379 F ++S ++ + Q + FF + K F Sbjct: 350 FAELSGEEIDEQPSSFFDKAKRAF 373 >gnl|CDD|172782 PRK14294, PRK14294, chaperone protein DnaJ; Provisional. Length = 366 Score = 385 bits (990), Expect = e-107 Identities = 176/362 (48%), Positives = 234/362 (64%), Gaps = 9/362 (2%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 M K D+Y++LG+ R+A++ ++K ++R LAMKYHPD+N D EA+E F + +EAYEVL DP Sbjct: 1 MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDP 60 Query: 61 QKRALYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSSST 120 +KR +YDQ GHE L G G GF S F ++FE FG G GR RS + Sbjct: 61 KKRGIYDQYGHEGLS-GTGFSGFSGFDDIF---SSFGDIFEDFFG--FGGGRR-GRSRTA 113 Query: 121 GEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSGRV 180 AGADLRY+L + EA G +IR C C GSG +PGT+P C C GSG+V Sbjct: 114 VRAGADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQV 173 Query: 181 YTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIRLS 240 T +Q FFSI C CRG G++I PC CHGQGRV K + V +P GVD G+R+RL Sbjct: 174 -TQSQGFFSIRTTCPRCRGMGKVIVSPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLR 232 Query: 241 GEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDATH 300 GEG AGV GG PGDLY+F++V+ H+FF+RDG D++C VPIS V A+G +V TL+ Sbjct: 233 GEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQAALGAQIEVPTLEGER 292 Query: 301 SRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFEQIS 360 + IP+GTQ G FR KGKG+P + G +GD ++V+V+ P +L K+Q ELL EF ++ Sbjct: 293 E-LKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQIIEVEVKVPTRLTKKQEELLTEFARLE 351 Query: 361 SQ 362 S+ Sbjct: 352 SE 353 >gnl|CDD|172789 PRK14301, PRK14301, chaperone protein DnaJ; Provisional. Length = 373 Score = 381 bits (979), Expect = e-106 Identities = 169/362 (46%), Positives = 227/362 (62%), Gaps = 9/362 (2%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 M + D+Y+VLG+ R+A++ ++K A+R LA++YHPD+N ++PEA++KF + +EAYEVLRD Sbjct: 1 MSQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDA 60 Query: 61 QKRALYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSSST 120 +KRA YD+ GH + G G D F IFG + G R Sbjct: 61 EKRARYDRFGHAGV-------NGNGGFGGFSSAEDIFSHFSDIFGDLFGFSGGGSRRGPR 113 Query: 121 GEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSGRV 180 +AG+DLRYNL +S +A G V +R P V C C GSGA PGT+P C C GSG+V Sbjct: 114 PQAGSDLRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQV 173 Query: 181 YTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIRLS 240 +Q FF I C CRG G++I HPC KC G G V + + L V +P GVD G+R+RL Sbjct: 174 -RQSQGFFQIAVPCPVCRGEGRVITHPCPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLR 232 Query: 241 GEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDATH 300 GEG GV+GG PGDLY+ I+V+ + F+R G DL T IS V A+G +V TLD Sbjct: 233 GEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAALGDRIEVPTLDDPV 292 Query: 301 SRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFEQIS 360 + + IP+GTQ+G+ FRL+GKG+P + S +KGDL V+V V TP KL KRQ ELL EFE + Sbjct: 293 T-LDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLVEVSVVTPTKLTKRQEELLREFEALE 351 Query: 361 SQ 362 + Sbjct: 352 EE 353 >gnl|CDD|184598 PRK14276, PRK14276, chaperone protein DnaJ; Provisional. Length = 380 Score = 354 bits (911), Expect = 2e-98 Identities = 163/388 (42%), Positives = 230/388 (59%), Gaps = 18/388 (4%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 M ++Y LG+ ++A+ ++K A+R L+ KYHPD N+ +P A+EK+ ++ EAYE L DP Sbjct: 1 MNNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINK-EPGAEEKYKEVQEAYETLSDP 59 Query: 61 QKRALYDQGGHEALE--YGAQSQGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSS 118 QKRA YDQ G +G + G GGF G G F ++F FGG G R R+ Sbjct: 60 QKRAAYDQYGAAGANGGFGGGAGGFGGFD-GSGGFGGFEDIFSSFFGG--GGAR---RNP 113 Query: 119 STGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSG 178 + G DL+Y + + EEA GK ++ + C TC+GSGAKPGT+P+ C C+GSG Sbjct: 114 NAPRQGDDLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSG 173 Query: 179 RVYTTAQSFFSIER---ACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGT 235 + Q+ + R C C G+G+ I PC CHG G + +SV +P GV+ G Sbjct: 174 VITVDTQTPLGMMRRQVTCDVCHGTGKEIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQ 233 Query: 236 RIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVAT 295 +IRL G+G AG GG GDLY+ V+ + F+RDG+ +Y T+PIS V A+G T +V T Sbjct: 234 QIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISFVQAALGDTVEVPT 293 Query: 296 LDATHSRV--TIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELL 353 + H V IP GTQTGK+FRL+GKG P + G GD +V V + TP KLN Q+E L Sbjct: 294 V---HGDVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHVTVNIVTPTKLNDAQKEAL 350 Query: 354 EEFEQISSQDN-NPQSTGFFARMKDFFD 380 + F + S + + NP+ GFF ++KD F+ Sbjct: 351 KAFAKASGEKDVNPKKKGFFDKVKDAFE 378 >gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional. Length = 378 Score = 349 bits (897), Expect = 8e-97 Identities = 168/387 (43%), Positives = 229/387 (59%), Gaps = 24/387 (6%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 +K D+Y+VLG+DRNA +++K A+R LA KYHPD + + A+EKF +ISEAY VL D Sbjct: 2 AEKRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVS-EEEGAEEKFKEISEAYAVLSDD 60 Query: 61 QKRALYDQGGHEALEYGAQSQGAGGFGA-GMYGNSDFSELFEGIFGGI------MGSGRS 113 +KR YDQ GH G GF ++ N +F ++F+G GI G G Sbjct: 61 EKRQRYDQFGH---------AGMDGFSQEDIFNNINFEDIFQGFGFGIGNIFDMFGFGGG 111 Query: 114 YKRSSSTGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNI 173 S + GAD+ +EI+LEEA SG I+ KC C+GS A+PG+ C Sbjct: 112 ---SRHGPQRGADIYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPT 168 Query: 174 CNGSGRVYTTAQSFFS---IERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPG 230 C G+G+V + C C+G G+I+ PCS CHG+G V E K +SV +P G Sbjct: 169 CGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKIVEKPCSNCHGKGVVRETKTISVKIPAG 228 Query: 231 VDDGTRIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGT 290 V+ G+R+R+SGEG G GG PGDLY+ I VK H+ F+R+GA+LY PIS V A+G T Sbjct: 229 VETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFVQAALGDT 288 Query: 291 FDVATLDATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQR 350 DV T+D + IP GTQ+G FRLKG GMP + KG+LYV+V+V P+KL+ +Q+ Sbjct: 289 VDVPTIDGP-VELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYVKVKVVVPKKLSPKQK 347 Query: 351 ELLEEFEQISSQDNNPQSTGFFARMKD 377 ELL EF IS + + G F ++KD Sbjct: 348 ELLREFASISGDEIHHVKKGLFDKVKD 374 >gnl|CDD|184600 PRK14278, PRK14278, chaperone protein DnaJ; Provisional. Length = 378 Score = 344 bits (885), Expect = 2e-95 Identities = 156/383 (40%), Positives = 216/383 (56%), Gaps = 19/383 (4%) Query: 5 DFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKRA 64 D+Y +LG+ RNA+D ++K A+R LA + HPD N D EA+EKF +IS AYEVL DP+KR Sbjct: 4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVN-PDEEAQEKFKEISVAYEVLSDPEKRR 62 Query: 65 LYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSSSTGEAG 124 + D GG + LE G GGFG G G ++FE FGG G+ R G Sbjct: 63 IVDLGG-DPLESAGG--GGGGFGGGFGG---LGDVFEAFFGG--GAASRGPRGRV--RPG 112 Query: 125 ADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSGRVYTTA 184 +D + + LEE +G T Q+ TAV C C G G + P+ C+ C G G V T Sbjct: 113 SDSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQ 172 Query: 185 QSFFS---IERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIRLSG 241 +SF R C TCRG G++IP PC +C G GRV + ++V +P GV DG RIRL+ Sbjct: 173 RSFLGQVMTSRPCPTCRGVGEVIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAA 232 Query: 242 EGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDATHS 301 +G G GG GDLY+ + + H F RDG DL+CTV + +V A+G T V + S Sbjct: 233 QGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPMVDAALGTTVTVEAILDGPS 292 Query: 302 RVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFEQISS 361 +TIP GTQ G L+G+GMP + SG +GDL+ V+V P +L+ ELL E + + Sbjct: 293 EITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHAHVEVVVPTRLDHEDIELLRELKALRG 352 Query: 362 QD-----NNPQSTGFFARMKDFF 379 ++ + G F+R+++ F Sbjct: 353 REVAEVRSTHAQGGLFSRLRETF 375 >gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional. Length = 380 Score = 343 bits (882), Expect = 4e-95 Identities = 167/389 (42%), Positives = 232/389 (59%), Gaps = 20/389 (5%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 M D+Y+VLG+++ A+D ++K AFR LA+KYHPD+N+ + EA+EKF +I+EAY+VL DP Sbjct: 1 MASKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDP 60 Query: 61 QKRALYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSEL------FEGIFGGIMGSGRSY 114 QK+A YDQ G A GAGGFG+G +G DFS++ F+ FGG GS Sbjct: 61 QKKAQYDQFGT------ADFNGAGGFGSGGFGGFDFSDMGGFGDIFDSFFGGGFGSSS-- 112 Query: 115 KRSSSTGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNIC 174 R + + GAD+ Y + ++ EEA G +I C TC+G+GAKPGT+P C+ C Sbjct: 113 -RRRNGPQRGADIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKC 171 Query: 175 NGSGRVYT---TAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGV 231 G+G++ T F C C GSG++I PC+KCHG+G+V + + + VNVP GV Sbjct: 172 GGTGQIRVQRNTPLGSFVSTTTCDKCGGSGKVIEDPCNKCHGKGKVRKNRKIKVNVPAGV 231 Query: 232 DDGTRIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTF 291 D G I L G+G G GG GDLYI I V H+ FKR G D+Y IS A+G Sbjct: 232 DTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISFAKAALGTEI 291 Query: 292 DVATLDATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRE 351 V T+D + +P GTQ G FRLKGKG+P +NS +G+ YV V V+ P+KLN +Q+E Sbjct: 292 KVPTVDG-EVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVTVIVDIPKKLNSKQKE 350 Query: 352 LLEEFEQISSQD-NNPQSTGFFARMKDFF 379 L F + S + + + F ++K F Sbjct: 351 ALTMFMEASGETVDGKEKKTIFEKIKKGF 379 >gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional. Length = 372 Score = 343 bits (880), Expect = 6e-95 Identities = 173/377 (45%), Positives = 244/377 (64%), Gaps = 11/377 (2%) Query: 5 DFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKRA 64 D+YQ+LG+ + A+ LK A+ LA +YHPD + +A++KF +I+ AY+VL+D QKRA Sbjct: 4 DYYQILGVSKTASQADLKKAYLKLAKQYHPD-TTDAKDAEKKFKEINAAYDVLKDEQKRA 62 Query: 65 LYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSSSTGEAG 124 YD+ GH+A + QS+G GG G + D +++F F MG R + +SS G Sbjct: 63 AYDRFGHDAFQN-QQSRGGGGNHGGFH--PDINDIFGDFFSDFMGGSRRSRPTSSKVR-G 118 Query: 125 ADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSGRVYTTA 184 +DL+YNL I+LEEAF G I F + VKC TC GSG++ G C+ C+G G Sbjct: 119 SDLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVG-ATRMQ 177 Query: 185 QSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIRLSGEGG 244 Q FF+IE+AC C+G+GQII +PC KCHG GR +++ LSVN+P GV++GTRIR +GEG Sbjct: 178 QGFFTIEQACHKCQGNGQIIKNPCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGE 237 Query: 245 AGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDATHSRVT 304 AG+ GG GDLY+ I++K H +K DGA+L+C +PIS V A+GG +V ++ +T Sbjct: 238 AGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAALGGEIEVPVIEGGKVNLT 297 Query: 305 IPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEF--EQISSQ 362 IP GTQ G Q RL+ KGM + S +GD+ + VE P+ L+KRQRELLEEF E I+ + Sbjct: 298 IPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTHIHVEVPKNLSKRQRELLEEFKKESINEK 357 Query: 363 DNNPQSTGFFARMKDFF 379 +N+ FF +MK + Sbjct: 358 END---GSFFNKMKSLW 371 >gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional. Length = 377 Score = 341 bits (875), Expect = 2e-94 Identities = 174/388 (44%), Positives = 236/388 (60%), Gaps = 23/388 (5%) Query: 3 KADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQK 62 D+Y++LG+ ++A+ +K A+R LAMKYHPD+N+ +P+A+EKF +ISEAY VL D +K Sbjct: 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNK-EPDAEEKFKEISEAYAVLSDAEK 62 Query: 63 RALYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSSSTGE 122 RA YD+ GH ++ Q F +G F ++FE FGG GR R Sbjct: 63 RAQYDRFGHAGID--NQYSAEDIFRGADFG--GFGDIFEMFFGGGGRRGRMGPRR----- 113 Query: 123 AGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSGRVYT 182 G+DLRY+L I+LEEA G I P A +CSTCSG+GAKPGT+P C C G+G+V T Sbjct: 114 -GSDLRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTT 172 Query: 183 TAQSF---FSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIRL 239 T + F CSTC G GQ+I PC C G G+V + + ++VNVP G D G R++L Sbjct: 173 TRSTPLGQFVTTTTCSTCHGRGQVIESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKL 232 Query: 240 SGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDAT 299 SGEG AG G GDLYI + VK+H +F+R G D+ +PIS A+G V TL Sbjct: 233 SGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFTQAALGADIMVPTL--- 289 Query: 300 HSRV--TIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFE 357 + +V IP GTQT FRLK KGMP ++ KGD V+V V+TP KL + Q+ELL EF+ Sbjct: 290 YGKVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVKVIVKTPTKLTQEQKELLREFD 349 Query: 358 QISSQDNNPQ----STGFFARMKDFFDS 381 ++S+ N + G F ++KD F+S Sbjct: 350 ELSNGKNPSKAGKKKKGIFDKVKDAFES 377 >gnl|CDD|184609 PRK14293, PRK14293, chaperone protein DnaJ; Provisional. Length = 374 Score = 331 bits (851), Expect = 2e-91 Identities = 156/378 (41%), Positives = 217/378 (57%), Gaps = 15/378 (3%) Query: 4 ADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKR 63 AD+Y++LG+ R+A +LK A+R LA KYHPD N+ +P A+++F +I+ AYEVL DP+ R Sbjct: 3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNK-EPGAEDRFKEINRAYEVLSDPETR 61 Query: 64 ALYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSSSTGEA 123 A YDQ G + GA GF M F+++FE F G G+G R G Sbjct: 62 ARYDQFGEAGV------SGAAGFP-DMGDMGGFADIFETFFSGFGGAGGQGGRRRRRGPQ 114 Query: 124 -GADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSG---R 179 G DLRY+L++ EA G +IR P C TC GSGAKPGT P C+ C G+G R Sbjct: 115 RGDDLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRR 174 Query: 180 VYTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIRL 239 T F+ C TC G+GQ+I PC C GQG K L +N+P GVD GTR+R+ Sbjct: 175 ATRTPFGSFTQVSECPTCNGTGQVIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRV 234 Query: 240 SGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDAT 299 SGEG AG+ GG PGDLY+++ VK F+RDG ++ + IS + +G T +V T+D Sbjct: 235 SGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISYLQAILGDTLEVDTVDGP 294 Query: 300 HSRVTIPEGTQTGKQFRLKGKGMPVI-NSGRKGDLYVQVQVETPQKLNKRQRELLEEFEQ 358 +TIP GTQ L+ KG+P + N +GD + V+V+ P +++ +RELLE+ + Sbjct: 295 VE-LTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAK 353 Query: 359 ISSQDNNPQS-TGFFARM 375 I + GFF + Sbjct: 354 IKGERQGKGGIEGFFGGL 371 >gnl|CDD|184606 PRK14287, PRK14287, chaperone protein DnaJ; Provisional. Length = 371 Score = 328 bits (842), Expect = 1e-90 Identities = 173/382 (45%), Positives = 248/382 (64%), Gaps = 17/382 (4%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 M K D+Y+VLG+DRNA+ ++K A+R LA KYHPD N+ P+A++KF ++ EAY+ L DP Sbjct: 1 MSKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNK-APDAEDKFKEVKEAYDTLSDP 59 Query: 61 QKRALYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSSST 120 QK+A YDQ GH +QG GG GAG +G FS++F+ FGG G GR R+ + Sbjct: 60 QKKAHYDQFGHTD-----PNQGFGGGGAGDFGG--FSDIFDMFFGG--GGGR---RNPNA 107 Query: 121 GEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSGRV 180 GADL+Y + + +EA GK +I P C TC GSGAKPGT P C+ C GSG++ Sbjct: 108 PRQGADLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQL 167 Query: 181 YTTAQSFFSI---ERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRI 237 + F R C C G+G+II C+ C G+G+V + K ++V VP G+D G ++ Sbjct: 168 NVEQNTPFGRVVNRRVCHHCEGTGKIIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQL 227 Query: 238 RLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLD 297 R+SG+G AGV GG PGDLY+ +VK H+FF+RDG D+YC +P++ VA+G +V TL+ Sbjct: 228 RVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTFPQVALGDEIEVPTLN 287 Query: 298 ATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFE 357 ++ IP GTQTG FRL+GKG+P ++ +GD +VQV+V TP+ L ++++EL+ EF Sbjct: 288 GK-VKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQVRVVTPKNLTEKEKELMREFA 346 Query: 358 QISSQDNNPQSTGFFARMKDFF 379 +S + Q+ GFFA++K F Sbjct: 347 GMSGGRPDEQNDGFFAKVKRAF 368 >gnl|CDD|184607 PRK14291, PRK14291, chaperone protein DnaJ; Provisional. Length = 382 Score = 326 bits (838), Expect = 5e-90 Identities = 156/375 (41%), Positives = 223/375 (59%), Gaps = 26/375 (6%) Query: 3 KADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQK 62 K D+Y++LG+ RNAT ++K A+R LA KYHPD N+N PEA+EKF +I+EAY+VL DP+K Sbjct: 2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN-PEAEEKFKEINEAYQVLSDPEK 60 Query: 63 RALYDQGGHEALE-YGAQSQGAGGFGAGMYGNSD--FSEL-----FEGIFGGIMGSG--- 111 R LYDQ GH A G Q QG GF GN + ++ F IFG + Sbjct: 61 RKLYDQFGHAAFSGSGQQQQGQEGFSDFGGGNIEDILEDVFDIFGFGDIFGRRRATRERR 120 Query: 112 RSYKRSSSTGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDC 171 ++Y+R G D+ +EISLEEA++G TV + P V C C G+G PG+ C Sbjct: 121 KTYQRP----VKGEDIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVC 176 Query: 172 NICNGSGRVYTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGV 231 C GSG +Y FF I + C TC G G ++ PCSKC+G+G V +++ + V +PPGV Sbjct: 177 PTCGGSGEIYQR-GGFFRISQTCPTCGGEG-VLREPCSKCNGRGLVIKKETIKVRIPPGV 234 Query: 232 DDGTRIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTF 291 D+G+++R+ G+G AG +GG PGDLYI + VK H F+R G +LY V I++ +G Sbjct: 235 DNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVLGTEL 294 Query: 292 DVATLDATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQK------- 344 +V LD +V IP GT+ G + R+ GKGMP + GDL V+V ++ P+ Sbjct: 295 EVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVVRVHIDVPKISMLSKLM 354 Query: 345 -LNKRQRELLEEFEQ 358 K+ ++LL+E ++ Sbjct: 355 GDGKKAKKLLKELDK 369 >gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional. Length = 372 Score = 324 bits (831), Expect = 3e-89 Identities = 163/379 (43%), Positives = 240/379 (63%), Gaps = 12/379 (3%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 M + +Y +LG+ ++A D ++K+A+R LA+KYHPD+N+ + E++EKF + +EAYE+LRDP Sbjct: 1 MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDP 60 Query: 61 QKRALYDQGGHEALEYGAQSQGAGGFGAGMYGN-----SDFSELFEGIFGGIMGSGRSYK 115 +KR YDQ G + + GAGGFG G Y + DF ++F FGG G G Sbjct: 61 KKRQAYDQFGKAGV-----NAGAGGFGQGAYTDFSDIFGDFGDIFGDFFGGGRGGGSGGG 115 Query: 116 RSSSTGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICN 175 R S + G+DLRYNLE+SLE+A G+ +I P C C+GSGA G++P C C Sbjct: 116 RRSGP-QRGSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCG 174 Query: 176 GSGRVYTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGT 235 GSG++ T Q FFS+ C TCRG G +I +PC C GQG + + +++ +PPGV+ G+ Sbjct: 175 GSGQIRRT-QGFFSVATTCPTCRGKGTVISNPCKTCGGQGLQEKRRTINIKIPPGVETGS 233 Query: 236 RIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVAT 295 R+++SGEG AG GG GDLY+ +KKH+ F+R G DL IS+ +G +V T Sbjct: 234 RLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQAILGAEIEVPT 293 Query: 296 LDATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEE 355 +D +++ IPEGT++G+ FRLKG GMP + + KGD +V V++E P+K+ +RQREL+EE Sbjct: 294 IDGKKAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVIVKIEIPKKITRRQRELIEE 353 Query: 356 FEQISSQDNNPQSTGFFAR 374 F + S ++ F + Sbjct: 354 FARESGENIPGSKGKIFTK 372 >gnl|CDD|184605 PRK14284, PRK14284, chaperone protein DnaJ; Provisional. Length = 391 Score = 322 bits (827), Expect = 1e-88 Identities = 153/392 (39%), Positives = 223/392 (56%), Gaps = 22/392 (5%) Query: 4 ADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKR 63 D+Y +LG+ + A+ ++K A+R LA+KYHPD+N D EA+++F ++SEAYEVL D QKR Sbjct: 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKR 60 Query: 64 ALYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFS-ELFEGIFGGIMGSGRSYKRS--SST 120 YD+ G + GAGGFG GN + + F G FGG G G S+ Sbjct: 61 ESYDRYGKDGP-----FAGAGGFGGAGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGL 115 Query: 121 GEA------------GADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNP 168 GEA GA + ++ +S EEA G ++ C CSGSGA Sbjct: 116 GEAFGMRGGPAGARQGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGI 175 Query: 169 MDCNICNGSGRVYTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVP 228 C+ C GSG+V + + FFS+ C C G G++I PCS C GQGR+ +++ + V++P Sbjct: 176 KVCDRCKGSGQVVQS-RGFFSMASTCPECGGEGRVITDPCSVCRGQGRIKDKRSVHVHIP 234 Query: 229 PGVDDGTRIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMG 288 GVD G R+++ G G AG G GDLY+FI V+ H F+R G DL +PI V A+G Sbjct: 235 AGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFVDAALG 294 Query: 289 GTFDVATLDATHS-RVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNK 347 ++ TL + R+TIPEG Q+G +++G+G P ++ +GDL V++ VETPQ L++ Sbjct: 295 MKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLLVRISVETPQNLSE 354 Query: 348 RQRELLEEFEQISSQDNNPQSTGFFARMKDFF 379 Q+ELL +F +N P+ F ++K FF Sbjct: 355 EQKELLRQFAATEKAENFPKKRSFLDKIKGFF 386 >gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional. Length = 369 Score = 294 bits (755), Expect = 2e-80 Identities = 140/370 (37%), Positives = 216/370 (58%), Gaps = 10/370 (2%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQN-RNDPEAKEKFAQISEAYEVLRD 59 +K D+Y++LG+ RNAT ++K A++ L ++HPD++ N EA++KF +I EAYEVL D Sbjct: 1 REKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSD 60 Query: 60 PQKRALYDQGGH--EALEYGAQSQGAGGFGAGMYGNSDFSELF-EGIFGGIMGSGRSYKR 116 PQKRA+YD+ G+ E Y +++ GGF ++ DF +F IF G R+ + Sbjct: 61 PQKRAMYDRFGYVGEQPPY-QETESGGGFFEDIF--KDFENIFNRDIFDIFFGERRTQEE 117 Query: 117 SSSTGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNG 176 G D+RY +E++L + +G + + + C C G+G +PG+ + C C+G Sbjct: 118 QREYARRGEDIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHG 177 Query: 177 SGRVYTTAQSFFSI---ERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDD 233 +GR+ +SFF + ER C C G+G+I C +C G GR+ +V +P GV+D Sbjct: 178 TGRIREERRSFFGVFVSERTCERCGGTGKIPGEYCHECGGSGRIRRRVRTTVKIPAGVED 237 Query: 234 GTRIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDV 293 GT +R++G G AG YGG GDLY+ + V+ FKR G+DL V I + +G T +V Sbjct: 238 GTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDYLQAILGTTVEV 297 Query: 294 ATLDATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELL 353 + + + IP GTQ FRLKGKG+P + GR+GDL V V VE P++L++ +R+LL Sbjct: 298 PLPEGGTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVNVHVEIPKRLSREERKLL 357 Query: 354 EEFEQISSQD 363 +E + Sbjct: 358 KELAKKRGVT 367 >gnl|CDD|184601 PRK14279, PRK14279, chaperone protein DnaJ; Provisional. Length = 392 Score = 291 bits (747), Expect = 2e-79 Identities = 147/372 (39%), Positives = 204/372 (54%), Gaps = 22/372 (5%) Query: 5 DFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKRA 64 DFY+ LG+ +A+ ++K A+R LA + HPD N DP A+E+F +SEA++VL DP KR Sbjct: 10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRK 69 Query: 65 LYDQ------GGHEALEYGAQSQGAGGFGAGMYG-NSDFSELFEG-----------IFGG 106 YD+ GG G GGFG G G + ++LF+ +FGG Sbjct: 70 EYDETRRLFAGGGFGGRRFDGGGGFGGFGTGGDGAEFNLNDLFDAAGRGGGGGIGDLFGG 129 Query: 107 IMGSGRSYKRSSSTGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGT 166 + G S G DL + EA G T+ +R + C+TC GSGA+PGT Sbjct: 130 LFNRG-GGSARPSRPRRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGT 188 Query: 167 NPMDCNICNGSGRVYTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVN 226 +P C CNGSG V + Q F C+ CRG+G II PC +C G G + + ++V Sbjct: 189 SPKVCPTCNGSG-VISRNQGAFGFSEPCTDCRGTGSIIEDPCEECKGTGVTTRTRTINVR 247 Query: 227 VPPGVDDGTRIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVA 286 +PPGV+DG RIRL+G+G AG+ G GDLY+ + V+ + F RDG DL TVP+S +A Sbjct: 248 IPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSFTELA 307 Query: 287 MGGTFDVATLDATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLN 346 +G T V TLD V +P GT G+ R++G+G+P SG GDL V V+V P L+ Sbjct: 308 LGSTLSVPTLDGP-VGVKVPAGTADGRILRVRGRGVPK-RSGGAGDLLVTVKVAVPPNLD 365 Query: 347 KRQRELLEEFEQ 358 E LE + + Sbjct: 366 GAAAEALEAYAE 377 >gnl|CDD|172769 PRK14281, PRK14281, chaperone protein DnaJ; Provisional. Length = 397 Score = 283 bits (726), Expect = 4e-77 Identities = 149/402 (37%), Positives = 224/402 (55%), Gaps = 29/402 (7%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 MK+ D+Y+VLG+ R+A ++K A+R LA+KYHPD+N ++ EA+E F +++EAYEVL + Sbjct: 1 MKR-DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSND 59 Query: 61 QKRALYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELFEGIFGGIMG----------- 109 KR YDQ GH + A S G G+G G +D F +FGG Sbjct: 60 DKRRRYDQFGHAGVGSSAASGGGPGYGGGGGDFNDIFSAFNDMFGGGARRGGGSPFGFED 119 Query: 110 --SGRSYKRSSSTGEAGADLRYNLEISLEEAFSG--KTVQIRFPTAVKCSTCSGSGAKPG 165 G +R +S G G DL+ L+++LEE G KT++I+ V C C+G+G+K G Sbjct: 120 VFGGGGRRRRASAGIPGTDLKIRLKLTLEEIAKGVEKTLKIK--KQVPCKECNGTGSKTG 177 Query: 166 TNPMDCNICNGSGRVYTTAQSFF----SIERACSTCRGSGQIIPHPCSKCHGQGRVSEEK 221 C C+GSG V +++ F +I AC TC G G+++ C C+G+G E Sbjct: 178 ATET-CPTCHGSGEVRQASKTMFGQFVNIT-ACPTCGGEGRVVKDRCPACYGEGIKQGEV 235 Query: 222 LLSVNVPPGVDDGTRIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPIS 281 + V VP GV DG + L G+G AG GGAPGDL + I K H+ F R+G D+ + +S Sbjct: 236 TVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLAVS 295 Query: 282 IVTVAMGGTFDVATLDATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVET 341 + +G +V TLD ++TIP GTQ R+ GKG+ + +GD YV+V V Sbjct: 296 YPDLVLGTKVEVPTLDG-AVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVRVNVFV 354 Query: 342 PQKLNKRQRELLEEFEQIS----SQDNNPQSTGFFARMKDFF 379 P++++ + +ELL+E ++ S + N+ + FF + KD F Sbjct: 355 PKEVSHQDKELLKELKKSSHISPNAHNDKEEKSFFEKAKDIF 396 >gnl|CDD|184608 PRK14292, PRK14292, chaperone protein DnaJ; Provisional. Length = 371 Score = 280 bits (717), Expect = 6e-76 Identities = 138/382 (36%), Positives = 208/382 (54%), Gaps = 21/382 (5%) Query: 4 ADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKR 63 D+Y++LG+ R A+ ++K+A+R LA+KYHPD+N+ + A EKFAQI+EAY VL D +KR Sbjct: 2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNK-EKGAAEKFAQINEAYAVLSDAEKR 60 Query: 64 ALYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFS--ELFEGIFGGIMGSGRSYKRSSSTG 121 A YD+ G + GAG G +G F ++FE +FGG G +R + G Sbjct: 61 AHYDRFG--------TAPGAGMPGGDPFGGMGFDPMDIFEQLFGGAGFGGGRGRRGPARG 112 Query: 122 EAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNP-MDCNICNGSGRV 180 + DL I+LE+A +G+ V++ +C C GS +PG P C C G+G V Sbjct: 113 D---DLETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAV 169 Query: 181 YTTAQSFFSI---ERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRI 237 A++ F + ++ C TCRG GQII PC+ C G+GR + + + V +P G+D+G RI Sbjct: 170 RAQARTIFGVVETQQPCPTCRGEGQIITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRI 229 Query: 238 RLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLD 297 R++G G G G GDLY+ I ++ H +R+ L I A+GG V TLD Sbjct: 230 RVAGMGNEGPGGN--GDLYVHIEMEPHPELRREQEHLIYEARIGFAKAALGGQITVPTLD 287 Query: 298 ATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFE 357 + + GTQ G RL+G+GMP + GDL V+ ++ P++L+ RE LE + Sbjct: 288 GPQV-IEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIVEYEIAVPKQLSPEAREALEAYA 346 Query: 358 QISSQDNNPQSTGFFARMKDFF 379 + + G F ++ F Sbjct: 347 RAVGDEVPEPHEGLFDKVGKLF 368 >gnl|CDD|172777 PRK14289, PRK14289, chaperone protein DnaJ; Provisional. Length = 386 Score = 279 bits (714), Expect = 1e-75 Identities = 144/390 (36%), Positives = 213/390 (54%), Gaps = 15/390 (3%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 +K D+Y+VLG+ + AT ++K A+R A++YHPD+N D EA+EKF + +EAY+VL DP Sbjct: 2 AEKRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDP 61 Query: 61 QKRALYDQGGHEALEYGAQSQGAGGFGAGMYG-NSDFSELFEGIFGGI-----MGSGRSY 114 KR+ YDQ GH + A G G G M S F ++F G GG G G S Sbjct: 62 DKRSRYDQFGHAGVGGAAGGGGFSGEGMSMEDIFSMFGDIFGGHGGGFGGFGGFGGGGSQ 121 Query: 115 KRSSSTGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNIC 174 +R G+DLR ++++L+E +G + + V CS C G+GA+ C C Sbjct: 122 QRVFR----GSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTC 177 Query: 175 NGSGRVYTTAQSFF---SIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGV 231 GSG V + + C TC G G+II C KC G+G V E++++V +P GV Sbjct: 178 KGSGSVTRVQNTILGTMQTQSTCPTCNGEGKIIKKKCKKCGGEGIVYGEEVITVKIPAGV 237 Query: 232 DDGTRIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTF 291 +G ++ ++G+G AG +GG GDL + I + H RD DL + +S+ T A+GG Sbjct: 238 AEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLLSVPTAALGGAV 297 Query: 292 DVATLDATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRE 351 +V T+D ++V I GTQ GK RL+ KG+P +N GDL V V V P+ L+K +++ Sbjct: 298 EVPTIDG-KAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLVNVSVYIPETLSKEEKQ 356 Query: 352 LLEEFEQISS-QDNNPQSTGFFARMKDFFD 380 LE+ E + + F + K FFD Sbjct: 357 TLEKMENSDNFKPTTSIKEKIFKKFKSFFD 386 >gnl|CDD|184610 PRK14295, PRK14295, chaperone protein DnaJ; Provisional. Length = 389 Score = 277 bits (710), Expect = 4e-75 Identities = 146/390 (37%), Positives = 206/390 (52%), Gaps = 30/390 (7%) Query: 5 DFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKRA 64 D+Y+VLG+ ++AT+ ++K A+R LA +YHPD N+ D +A+E+F +ISEAY+VL D +KR Sbjct: 10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRK 69 Query: 65 LYDQG----GHEALEYGAQSQGAGGF--------------GAGMYGNSDFSELFEGIFGG 106 YD+ G+ G G GGF G G G ++F G+F Sbjct: 70 EYDEARSLFGNGGFRPGPGGGGGGGFNFDLGDLFGGGAQGGGGAGGGGGLGDVFGGLFNR 129 Query: 107 IMGSGRSYKRSSSTGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGT 166 G R+ R GAD+ + +S EA G TV +R + C CSG+GAK GT Sbjct: 130 --GGRRTQPRR------GADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGT 181 Query: 167 NPMDCNICNGSGRVYTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVN 226 P C C+G+G+V + FS+ C C+G G I PC C G GR + + V Sbjct: 182 TPRVCPTCSGTGQV-SRNSGGFSLSEPCPDCKGRGLIADDPCLVCKGSGRAKSSRTMQVR 240 Query: 227 VPPGVDDGTRIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVA 286 +P GV DG RIRL G+G G GG GDLY+ + V H F R G +L TVP++ A Sbjct: 241 IPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVTFPEAA 300 Query: 287 MGGTFDVATLDATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLN 346 +G V TL V +P GT G+ R++GKG G +GDL V V+V P+ L+ Sbjct: 301 LGAEVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKGAVR-KDGTRGDLLVTVEVAVPKDLS 359 Query: 347 KRQRELLEEFEQISSQDNNPQSTGFFARMK 376 + RE LE F + ++ D +P++ F K Sbjct: 360 GKAREALEAF-REATADEDPRA-ELFQAAK 387 >gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional. Length = 365 Score = 276 bits (707), Expect = 7e-75 Identities = 137/360 (38%), Positives = 215/360 (59%), Gaps = 13/360 (3%) Query: 3 KADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQK 62 K D+Y++LG+ + A+ ++K A+R +A+KYHPD+N+ + EA+ F + +EAYEVL D K Sbjct: 2 KRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNK 61 Query: 63 RALYDQGGHEALEYGAQSQGAGGFGAGMYGNSD----FSELFEGIFGGIMGSGRSYKRSS 118 RA YD+ GH A E G G GF G G SD F ++F+ F G G ++ K Sbjct: 62 RAQYDRFGHTAFEGGG---GFEGFSGGFSGFSDIFEDFGDIFDSFFTGNRGQDKNRKH-- 116 Query: 119 STGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSG 178 E G DL Y +EISLE+A+ G I + C +C G ++ GT+P CN+CNGSG Sbjct: 117 ---EKGQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSG 173 Query: 179 RVYTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIR 238 RV FF + C C G+G+II +PC C G+G + +++ + + +P G+DD +I+ Sbjct: 174 RV-MQGGGFFRVTTTCPKCYGNGKIISNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIK 232 Query: 239 LSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDA 298 + G+G GDLYI I +K H+ FKR+G DLY T+PIS A+G + T+ + Sbjct: 233 MRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQAALGKEIKIQTIAS 292 Query: 299 THSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFEQ 358 ++ IP+GT+ +Q +K +GMP++++ + G+L + ++++TP+ LN +LLE + Sbjct: 293 KKIKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILIIKIKTPKNLNSNAIKLLENLSK 352 >gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional. Length = 365 Score = 274 bits (703), Expect = 2e-74 Identities = 144/362 (39%), Positives = 207/362 (57%), Gaps = 16/362 (4%) Query: 5 DFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQN-RNDPEAKEKFAQISEAYEVLRDPQKR 63 D+Y++LG+DRNA+ +K AFR LA K+HPD + N EA+EKF +ISEAYEVL DPQKR Sbjct: 4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKR 63 Query: 64 ALYDQGGHEALEYGAQSQGAGGFGAGMYGN-SDFSELFEGIFGGIMGSG--RSYKRSSST 120 YDQ G +++GA G F + + SD +++F IFGG GS + ST Sbjct: 64 RQYDQTG--TVDFGA---GGSNFNWDNFTHFSDINDIFNQIFGGNFGSDFFSGFGNQQST 118 Query: 121 GEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSGRV 180 D+ NL+ISLE+A+ G +I++ C CSG+GAK G + C C+G+G+ Sbjct: 119 RNIDLDIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGK-LITCPTCHGTGQQ 177 Query: 181 YTT-AQSFFSIERA--CSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRI 237 Q FF + C TC G G+I C +C+G G V + +SV +P G D R+ Sbjct: 178 RIVRGQGFFRMVTVTTCRTCGGRGRIPEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRL 237 Query: 238 RLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLD 297 R+ G+G + YGG GDLY+ + V +R DLY I+ A+GG ++ Sbjct: 238 RVKGKGQS--YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQAALGGEIEIKLFR 295 Query: 298 ATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFE 357 ++ + IPEGTQ G+ ++KG GMP +N GDL V++ VE P++L +Q+EL+ EF Sbjct: 296 EKYN-LKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVRINVEVPKRLTSKQKELIREFF 354 Query: 358 QI 359 I Sbjct: 355 DI 356 >gnl|CDD|172784 PRK14296, PRK14296, chaperone protein DnaJ; Provisional. Length = 372 Score = 235 bits (601), Expect = 1e-62 Identities = 120/374 (32%), Positives = 203/374 (54%), Gaps = 24/374 (6%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 MKK D+Y+VLG+ + A++++++ A+R LA +YHPD N+ P+A +K +I+EA +VL D Sbjct: 1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNK-SPDAHDKMVEINEAADVLLDK 59 Query: 61 QKRALYDQGGHEALEYGAQSQGAGGFGAGMYGNSD-FSEL-------FEGIFGGIMGSGR 112 KR YDQ GH A + G+ GF + D FS + F IF GS + Sbjct: 60 DKRKQYDQFGHAAFD------GSSGFSSNFGDFEDLFSNMGSSGFSSFTNIFSDFFGSNK 113 Query: 113 SYKRSSSTGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCN 172 S + S+ G+ + ++ ++ +E G I CS C GSGA+ ++ CN Sbjct: 114 SDYQRSTKGQ---SVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICN 170 Query: 173 ICNGSGRVYTTAQ-SFFSIERA--CSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPP 229 C+G+G V FF +++ C+ C G+G+II + C C G+G+ E K + VN+P Sbjct: 171 NCHGTGEVLVQKNMGFFQFQQSAKCNVCNGAGKIIKNKCKNCKGKGKYLERKKIEVNIPK 230 Query: 230 GVDDGTRIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKR-DGADLYCTVPISIVTVAMG 288 G+ +I+LS +G A + G GDL I I +K+ + F+ + D+ T IS + +G Sbjct: 231 GIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMTYNISYLDAILG 290 Query: 289 GTFDVATLDATHSRVTIPEGTQTGKQFRLKGKGM-PVINSGRKGDLYVQVQVETPQKLNK 347 + TLD + +P+ + + + KG+ IN ++GDL ++V + P+ L+K Sbjct: 291 NEIIIKTLDGD-IKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSK 349 Query: 348 RQRELLEEFEQISS 361 +++EL+E+ + +S Sbjct: 350 KEKELIEQIYEQTS 363 >gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional. Length = 369 Score = 209 bits (534), Expect = 7e-55 Identities = 130/383 (33%), Positives = 204/383 (53%), Gaps = 28/383 (7%) Query: 6 FYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKRAL 65 +Y++L +++++ +K ++R LA+KYHPD+N D EA+EKF I+EAY VL D +KRAL Sbjct: 5 YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRAL 64 Query: 66 YDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELFEGI---FGGIMG-SGRSYKRSSSTG 121 YD+ G + L SQ SDFS+ FE + F G R KR S+ Sbjct: 65 YDRYGKKGLNQAGASQ------------SDFSDFFEDLGSFFEDAFGFGARGSKRQKSS- 111 Query: 122 EAGADLRYNLEISLEEAFSG--KTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSGR 179 D +E+S +EA G KT+++++ + C +C G+GAK C CNG G+ Sbjct: 112 -IAPDYLQTIELSFKEAVFGCKKTIKVQYQSV--CESCDGTGAKDKALE-TCKQCNGQGQ 167 Query: 180 VYTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIRL 239 V+ Q F S + C C+G G+II PC C G+ + +++ + +P G+DD R+ L Sbjct: 168 VFMR-QGFMSFAQTCGACQGKGKIIKTPCQACKGKTYILKDEEIDAIIPEGIDDQNRMVL 226 Query: 240 SGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDAT 299 +G G GDLY+ VK+ + FKR+G DL+ P+ T+A+G T V +L Sbjct: 227 KNKGNE-YEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALGHTIKVPSLKGD 285 Query: 300 HSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFEQI 359 + IP + + F + +G+ S +G L V++QV P+ LNK Q+ELLE+ Sbjct: 286 ELELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIVELQVIYPKSLNKEQQELLEKLHAS 345 Query: 360 SSQDNNPQSTGF---FARMKDFF 379 + P + +++KD+F Sbjct: 346 FGYEGEPHKSVLETCISKIKDWF 368 >gnl|CDD|173334 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional. Length = 421 Score = 200 bits (509), Expect = 7e-52 Identities = 122/360 (33%), Positives = 180/360 (50%), Gaps = 37/360 (10%) Query: 6 FYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKRAL 65 Y+VL + ++ T ++K A+R LA+K+HPD+ DPE KF +IS AYEVL DP+KR + Sbjct: 30 LYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG-GDPE---KFKEISRAYEVLSDPEKRKI 85 Query: 66 YDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSSSTGEAGA 125 YD+ G E LE G +D S+LF+ IFGG G KR G Sbjct: 86 YDEYGEEGLE-------------GGEQPADASDLFDLIFGGGRKPGGK-KR-------GE 124 Query: 126 DLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSG-RVYTTA 184 D+ +L+++LE+ ++G ++ V C+ C G G P +DC +CNG G RV Sbjct: 125 DIVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGG-PKDAFVDCKLCNGQGIRVQIRQ 183 Query: 185 QS--FFSIERACSTCRGSGQIIPHP--CSKCHGQGRVSEEKLLSVNVPPGVDDGTRIRLS 240 + C++C G G+IIP C C G+G K+L VN+ GV + +I Sbjct: 184 MGSMIHQTQSTCNSCNGQGKIIPESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFH 243 Query: 241 GEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDATH 300 GE PG++ ++ K H FKR+G DL+ T IS+ G F + LD Sbjct: 244 GEADEKP-NEIPGNVVFILNEKPHDTFKREGGDLFITKKISLYEALTGFVFYITHLDGRK 302 Query: 301 SRVTIPEG--TQTGKQFRLKGKGMPVINSG-RKGDLYVQVQVETP--QKLNKRQRELLEE 355 V P G + G + +GMP S +KG+LYV +V P +K ++E+L+ Sbjct: 303 LLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKS 362 >gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional. Length = 306 Score = 175 bits (445), Expect = 2e-44 Identities = 102/371 (27%), Positives = 165/371 (44%), Gaps = 71/371 (19%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 M+ D+Y ++G+ + +KTA+R LA KYHPD ++ +P+A+ +F +++EA+EVL D Sbjct: 1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSK-EPDAEARFKEVAEAWEVLSDE 59 Query: 61 QKRALYDQ--GGHEALEYGAQSQGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSS 118 Q+RA YDQ ++ Q Q G + DF ++F IFG + + Sbjct: 60 QRRAEYDQLWQHRNDPQFNRQFQHGDG---QSFNAEDFDDIFSSIFG-----QHARQSRQ 111 Query: 119 STGEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSG 178 G D+ + + LEE + I + V N G Sbjct: 112 RPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVY---------------------NAFG 150 Query: 179 RVYTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIR 238 + Q IP K L+V +P GV +G RIR Sbjct: 151 MI--------------------EQEIP---------------KTLNVKIPAGVGNGQRIR 175 Query: 239 LSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDA 298 L G+G G GG GDL++ I + H F G DL VP++ A+G V TL Sbjct: 176 LKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKE 235 Query: 299 THSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFEQ 358 + +TIP G+Q G++ R+KGKG+ ++ + GDLY +++ P K +++ L ++ Sbjct: 236 SIL-LTIPPGSQAGQRLRVKGKGL--VSKKQTGDLYAVLKIVMPPKPDEKTAALWQQLAD 292 Query: 359 ISSQDNNPQST 369 + +P+ Sbjct: 293 -AQSSFDPRKD 302 >gnl|CDD|184613 PRK14299, PRK14299, chaperone protein DnaJ; Provisional. Length = 291 Score = 146 bits (370), Expect = 8e-36 Identities = 112/374 (29%), Positives = 158/374 (42%), Gaps = 103/374 (27%) Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60 M D+Y +LG+ +NA+ ++K AF+ LA KYHPD N+ P A+EKF +I+EAY VL DP Sbjct: 1 MAYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNK-SPGAEEKFKEINEAYTVLSDP 59 Query: 61 QKRALYDQGGHEALEYGAQSQGAGGFGAGMYGNS---DFSELFEGIFGGIMGSGRSYKRS 117 +KR +YD G A G Q G G G + DFS+ F+ +FGG G G Sbjct: 60 EKRRIYDTYGTTAASAGWQGPPPGPPGGGDFSGFNVGDFSDFFQQLFGGRGGFGGFGDLF 119 Query: 118 SSTG---EAGADLRYNLEISLEEAF---------SGKTVQIRFPTAVKCSTCSGSGAKPG 165 S G G DL L ++LEEA+ +G+ + +R P V+ Sbjct: 120 GSVGRRARKGRDLEAELPLTLEEAYRGGEKVVEVAGERLSVRIPPGVR------------ 167 Query: 166 TNPMDCNICNGSGRVYTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSV 225 GQ+I G+GR + L V Sbjct: 168 ----------------------------------EGQVIRLA-----GKGRQGGDLYLVV 188 Query: 226 NVPPGVDDGTRIRLSGEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTV 285 + P RL G+ DLY + V PI++V Sbjct: 189 RLLPHPV----FRLEGD-----------DLYATVDVP---------------APIAVV-- 216 Query: 286 AMGGTFDVATLDATHSRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKL 345 GG V TLD VTIP TQ G++ RLKGKG P +GR GD Y +V++ P + Sbjct: 217 --GGKVRVMTLDGP-VEVTIPPRTQAGRKLRLKGKGWPRGPAGR-GDQYAEVRITIPTRP 272 Query: 346 NKRQRELLEEFEQI 359 + L ++ ++ Sbjct: 273 TPEEERLYKQLAEL 286 >gnl|CDD|163547 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility. Length = 871 Score = 98.7 bits (245), Expect = 2e-21 Identities = 51/123 (41%), Positives = 74/123 (60%), Gaps = 7/123 (5%) Query: 3 KADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQK 62 K D+Y+VLGIDR+A ++++K AFR LA KYHPD+N P+A FA+I+EA +VL +P+K Sbjct: 1 KRDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRN-KAPDAASIFAEINEANDVLSNPKK 59 Query: 63 RALYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELFE-GIFGGIMGSGRSYKRSSSTG 121 RA YD+ GH+ G + F A ++ NS F E+ + G F I K+ Sbjct: 60 RANYDKYGHD----GVDREDDFDFQADVF-NSFFEEINKSGEFDNITDDDTPSKKKKKKK 114 Query: 122 EAG 124 + G Sbjct: 115 KKG 117 Score = 41.3 bits (96), Expect = 5e-04 Identities = 34/145 (23%), Positives = 52/145 (35%), Gaps = 20/145 (13%) Query: 243 GGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDATHSR 302 G +G GDL + V FF+ L+ + + GG DV + Sbjct: 717 GFGHDFGNGCGDLKVVFKVIPSNFFQIKNDGLHVAALVDPLVAYNGGIIDVFGPN-KLFN 775 Query: 303 VTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQV--------------QVETPQKLNKR 348 V IP G + Q K G+ KG L V + QV+ KL R Sbjct: 776 VRIPGGIKVNDQVIFKDLGL-TKTKYDKGSLIVHLYYSSVMKKNDRTNVQVQQFNKLALR 834 Query: 349 QRELL----EEFEQISSQDNNPQST 369 + +LL +E + S +N + + Sbjct: 835 EYKLLKYNQKELQNFQSNLSNGKKS 859 >gnl|CDD|128567 smart00271, DnaJ, DnaJ molecular chaperone homology domain. Length = 60 Score = 93.8 bits (234), Expect = 6e-20 Identities = 33/59 (55%), Positives = 48/59 (81%), Gaps = 1/59 (1%) Query: 5 DFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDP-EAKEKFAQISEAYEVLRDPQK 62 D+Y++LG+ R+A+ ++K A+R LA+KYHPD+N D EA+EKF +I+EAYEVL DP+K Sbjct: 2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60 >gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional. Length = 1136 Score = 51.7 bits (123), Expect = 4e-07 Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 1/70 (1%) Query: 6 FYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKRAL 65 FY +LG+ NA +++ + LA Y+P + R+ E KF +I+EAY++L D K+ + Sbjct: 575 FYDILGVGVNADMKEISERYFKLAENYYPPK-RSGNEGFHKFKKINEAYQILGDIDKKKM 633 Query: 66 YDQGGHEALE 75 Y++ G++ ++ Sbjct: 634 YNKFGYDGIK 643 >gnl|CDD|166894 PRK00294, hscB, co-chaperone HscB; Provisional. Length = 173 Score = 47.9 bits (114), Expect = 4e-06 Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 7/60 (11%) Query: 20 QLKTAFRSLAMKYHPDQNRNDPE-----AKEKFAQISEAYEVLRDPQKRALY--DQGGHE 72 QL T +R LA + HPD+ + PE A E+ A ++EAY+ L+ P +RA Y GHE Sbjct: 22 QLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLALSGHE 81 >gnl|CDD|179598 PRK03578, hscB, co-chaperone HscB; Provisional. Length = 176 Score = 46.5 bits (111), Expect = 1e-05 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 7/73 (9%) Query: 1 MKKADFYQVLGIDRN-ATDRQ-LKTAFRSLAMKYHPDQNRNDPEAKEKFA-----QISEA 53 K D + + G+ A D L A+R++ + HPD+ +A+++ A + +EA Sbjct: 3 SLKDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEA 62 Query: 54 YEVLRDPQKRALY 66 Y+ LRDP KRA Y Sbjct: 63 YQTLRDPLKRARY 75 >gnl|CDD|181850 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional. Length = 267 Score = 46.3 bits (111), Expect = 1e-05 Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 7/62 (11%) Query: 4 ADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQ--NRNDPE-----AKEKFAQISEAYEV 56 D Y+VLG+ + D+++K A+R L ++HPD+ + P AKEK +I AYE+ Sbjct: 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYEL 259 Query: 57 LR 58 ++ Sbjct: 260 IK 261 >gnl|CDD|179914 PRK05014, hscB, co-chaperone HscB; Provisional. Length = 171 Score = 45.7 bits (109), Expect = 2e-05 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 5/52 (9%) Query: 20 QLKTAFRSLAMKYHPDQNRNDPE-----AKEKFAQISEAYEVLRDPQKRALY 66 L + ++ L ++HPD+ N E A ++ A I++AY+ L+ P KRA Y Sbjct: 19 LLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEY 70 >gnl|CDD|167217 PRK01356, hscB, co-chaperone HscB; Provisional. Length = 166 Score = 45.3 bits (107), Expect = 3e-05 Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 7/68 (10%) Query: 5 DFYQVLGI--DRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQIS----EAYEVLR 58 +++Q+LG+ + N + L+ + ++ +KYHPD+ + E KE+ I+ AY L+ Sbjct: 3 NYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQE-KEQNLIIASELNNAYSTLK 61 Query: 59 DPQKRALY 66 D KRA Y Sbjct: 62 DALKRAEY 69 >gnl|CDD|129797 TIGR00714, hscB, Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock. Length = 157 Score = 38.0 bits (88), Expect = 0.005 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Query: 21 LKTAFRSLAMKYHPDQN-----RNDPEAKEKFAQISEAYEVLRDPQKRALY 66 L ++ L +YHPD+ + A ++ +++AY+ L+DP RA Y Sbjct: 8 LSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEY 58 >gnl|CDD|177528 PHA03102, PHA03102, Small T antigen; Reviewed. Length = 153 Score = 36.6 bits (85), Expect = 0.011 Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 9/95 (9%) Query: 8 QVLGIDRNA--TDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKRAL 65 +LG+ R+A ++ A+ +++HPD+ ++ EK +++ Y+ R+ K Sbjct: 9 DLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDE----EKMKELNTLYKKFRESVKSLR 64 Query: 66 YDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELF 100 G E + G+ +G + L+ Sbjct: 65 DLDG--EEDSSSEEEDVPSGYVGATFG-DRVNALY 96 >gnl|CDD|162959 TIGR02642, phage_xxxx, uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q. Length = 186 Score = 32.2 bits (73), Expect = 0.25 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%) Query: 153 KCSTCSGSGAKPGTNPMDCNICNGSGRVYTT 183 KC C G+G +C+ C G+GR T Sbjct: 101 KCPRCRGTGLIQRRQR-ECDTCAGTGRFRPT 130 Score = 32.2 bits (73), Expect = 0.26 Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 4/29 (13%) Query: 192 RACSTCRGSGQIIPHP---CSKCHGQGRV 217 C CRG+G +I C C G GR Sbjct: 100 CKCPRCRGTG-LIQRRQRECDTCAGTGRF 127 >gnl|CDD|162790 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases. Length = 508 Score = 31.7 bits (72), Expect = 0.30 Identities = 13/25 (52%), Positives = 16/25 (64%) Query: 233 DGTRIRLSGEGGAGVYGGAPGDLYI 257 G R+RL G+GG V G PG+L I Sbjct: 337 PGYRLRLVGDGGQDVAAGEPGELLI 361 >gnl|CDD|177441 PHA02624, PHA02624, large T antigen; Provisional. Length = 647 Score = 30.7 bits (70), Expect = 0.62 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 13/77 (16%) Query: 8 QVLGIDR----NATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDPQKR 63 +LG+ N ++ A+ +YHPD+ ++ EK +++ Y+ L++ K Sbjct: 15 DLLGLPMAAWGNLPL--MRKAYLRKCKEYHPDKGGDE----EKMKRLNSLYKKLQEGVKS 68 Query: 64 ALYDQGGHEALE---YG 77 A G ++ E YG Sbjct: 69 ARQSFGTQDSSEIPTYG 85 >gnl|CDD|151679 pfam11237, DUF3038, Protein of unknown function (DUF3038). This family of proteins with unknown function appear to be restricted to Cyanobacteria. Length = 171 Score = 30.3 bits (69), Expect = 0.75 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 7/43 (16%) Query: 345 LNKRQ----RELLEEFEQISSQDNNPQSTGFFARMKDFFDSLK 383 L KR R+LL EQ+SSQ+ P T + ++ D + Sbjct: 79 LAKRLYPLIRQLLLLLEQMSSQEPPPLQT---QLLSEYLDRFR 118 >gnl|CDD|182039 PRK09706, PRK09706, transcriptional repressor DicA; Reviewed. Length = 135 Score = 30.2 bits (68), Expect = 0.81 Identities = 13/42 (30%), Positives = 26/42 (61%) Query: 337 VQVETPQKLNKRQRELLEEFEQISSQDNNPQSTGFFARMKDF 378 V + P +L++ Q+ELLE F+ + + + Q + AR+++F Sbjct: 77 VPLNQPVELSEDQKELLELFDALPESEQDAQLSEMRARVENF 118 >gnl|CDD|182098 PRK09828, PRK09828, putative fimbrial outer membrane usher protein; Provisional. Length = 865 Score = 30.5 bits (69), Expect = 0.84 Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 1/34 (2%) Query: 285 VAMGGTFDVATLDATHSRVTIPE-GTQTGKQFRL 317 + M + D THS IP+ T G+ +RL Sbjct: 413 LGMNTSVGAFAFDVTHSNAEIPDDKTYQGQSYRL 446 >gnl|CDD|180564 PRK06446, PRK06446, hypothetical protein; Provisional. Length = 436 Score = 30.1 bits (68), Expect = 0.94 Identities = 12/25 (48%), Positives = 15/25 (60%) Query: 320 KGMPVINSGRKGDLYVQVQVETPQK 344 KG P I G KG LYV++ + T K Sbjct: 169 KGRPQIVLGVKGLLYVELVLRTGTK 193 >gnl|CDD|162275 TIGR01263, 4HPPD, 4-hydroxyphenylpyruvate dioxygenase. This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin. Length = 353 Score = 28.8 bits (65), Expect = 2.8 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 5/25 (20%) Query: 79 QSQGAGGFGAGMYGNSDFSELFEGI 103 Q +GAGGFG G +F LFE I Sbjct: 324 QRKGAGGFGEG-----NFKALFEAI 343 >gnl|CDD|182916 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional. Length = 741 Score = 28.4 bits (64), Expect = 3.1 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 4/24 (16%) Query: 285 VAMGGTFDVA--TLDA--THSRVT 304 +AMG DVA T DA TH+R+ Sbjct: 651 IAMGSGTDVALETADAALTHNRLR 674 >gnl|CDD|184095 PRK13504, PRK13504, sulfite reductase subunit beta; Provisional. Length = 569 Score = 28.6 bits (65), Expect = 3.2 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 10/59 (16%) Query: 18 DRQLKTAFRSLAMKYHPD----QNRN------DPEAKEKFAQISEAYEVLRDPQKRALY 66 R LKT R +A + D N+N P K K + Y ++ ++ L Sbjct: 370 GRPLKTGLREIAKIHKGDFRLTANQNLIIANVPPSDKAKIEALLREYGLIDGVEESPLR 428 >gnl|CDD|118803 pfam10279, Latarcin, Latarcin precursor. This family represents the precursor proteins for a number of short antimicrobial peptides called Latarcins. Latarcins were discovered in the venom of the spider Lachesana tarabaevi. Latarcins are likely to adopt amphipathic alpha-helical structure in the plasma membrane. Length = 88 Score = 28.3 bits (63), Expect = 3.6 Identities = 7/34 (20%), Positives = 18/34 (52%) Query: 351 ELLEEFEQISSQDNNPQSTGFFARMKDFFDSLKN 384 ++ E E++ +N ++ GFF ++K+ + Sbjct: 49 DIAEALEKLEDFENTEEARGFFGKLKEKLKKFRE 82 >gnl|CDD|151545 pfam11101, DUF2884, Protein of unknown function (DUF2884). Some members in this bacterial family of proteins are annotated as YggN which currently has no known function. Length = 229 Score = 28.1 bits (63), Expect = 3.7 Identities = 9/48 (18%), Positives = 18/48 (37%), Gaps = 3/48 (6%) Query: 311 TGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFEQ 358 + + K P G L+V + L+ Q++ LE++ Sbjct: 12 DPQSLEVVDKSGPKYQIDEDGQLFVDGK---WVTLSADQQQALEQYSD 56 >gnl|CDD|165115 PHA02748, PHA02748, viral inexin-like protein; Provisional. Length = 360 Score = 28.1 bits (63), Expect = 4.0 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Query: 167 NPMDCNIC---NGSGRVYTTAQSFFSIERACSTCRGSGQIIPHP 207 +P+DC+ NGS Y QS F +ER +P P Sbjct: 50 DPIDCDFPDYPNGSLNTYCYVQSTFLVER--KVTHTVNSTVPDP 91 >gnl|CDD|167016 PRK00635, PRK00635, excinuclease ABC subunit A; Provisional. Length = 1809 Score = 28.3 bits (63), Expect = 4.1 Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 6/28 (21%) Query: 193 ACSTCRGSGQII------PHPCSKCHGQ 214 AC+ C+G G I PC C G+ Sbjct: 722 ACAECQGLGSITTTDNRTSIPCPSCLGK 749 >gnl|CDD|184529 PRK14133, PRK14133, DNA polymerase IV; Provisional. Length = 347 Score = 27.8 bits (62), Expect = 4.8 Identities = 11/23 (47%), Positives = 15/23 (65%) Query: 205 PHPCSKCHGQGRVSEEKLLSVNV 227 P P SK HG G+ S EKL ++ + Sbjct: 172 PLPISKVHGIGKKSVEKLNNIGI 194 >gnl|CDD|180310 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional. Length = 509 Score = 27.7 bits (62), Expect = 4.8 Identities = 10/17 (58%), Positives = 13/17 (76%) Query: 339 VETPQKLNKRQRELLEE 355 VET KL + +RELL+E Sbjct: 354 VETINKLGRIERELLQE 370 >gnl|CDD|148612 pfam07104, DUF1366, Protein of unknown function (DUF1366). This family consists of several hypothetical Streptococcus thermophilus bacteriophage proteins of around 130 residues in length. One of the sequences in this family, from phage Sfi11 is known as Gp149. The function of this family is unknown. Length = 119 Score = 27.6 bits (61), Expect = 5.4 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 8/67 (11%) Query: 301 SRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFEQIS 360 S + + + + + L + ++ V + E ++K E L+E E+I Sbjct: 8 SPEYLEDKSISATKVILAN-----RDPHVGANVPVFLPAE---FIDKSFAETLKECEKII 59 Query: 361 SQDNNPQ 367 Q+ PQ Sbjct: 60 YQELFPQ 66 >gnl|CDD|185184 PRK15284, PRK15284, putative fimbrial outer membrane usher protein StfC; Provisional. Length = 881 Score = 27.5 bits (61), Expect = 6.6 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 5/35 (14%) Query: 284 TVAMGGTFDVATL-----DATHSRVTIPEGTQTGK 313 + A+G D+A D THS + + + GK Sbjct: 417 SAALGVGRDLALFGAVAFDVTHSHTKLDKDSAYGK 451 >gnl|CDD|178463 PLN02875, PLN02875, 4-hydroxyphenylpyruvate dioxygenase. Length = 398 Score = 27.3 bits (61), Expect = 7.2 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 5/25 (20%) Query: 79 QSQGAGGFGAGMYGNSDFSELFEGI 103 Q+ G GGFG G +FSELF+ I Sbjct: 370 QAGGCGGFGKG-----NFSELFKSI 389 >gnl|CDD|181824 PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed. Length = 924 Score = 27.0 bits (61), Expect = 8.0 Identities = 6/12 (50%), Positives = 10/12 (83%) Query: 231 VDDGTRIRLSGE 242 +D+G +RLSG+ Sbjct: 598 LDEGYPVRLSGQ 609 >gnl|CDD|161731 TIGR00145, TIGR00145, FTR1 family protein. A characterized member from yeast acts as oxidase-coupled high affinity iron transporter. Note that the apparent member from E. coli K12-MG1655 has a frameshift by homology with member sequences from other species. Length = 283 Score = 27.0 bits (60), Expect = 8.4 Identities = 21/70 (30%), Positives = 25/70 (35%), Gaps = 14/70 (20%) Query: 78 AQSQGAGGFGAGMYGNS---DFSELFEGIFGGIMGSGRSY-----KRSSSTGEAGADLRY 129 A G G YG+ +F EL EGIFG I SY R R Sbjct: 50 AACLAIGIGVIGAYGSLQKDEFKELLEGIFGVIAVVMLSYMGLWMLRMQR------KWRV 103 Query: 130 NLEISLEEAF 139 +E L +A Sbjct: 104 KIERQLVQAL 113 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.317 0.135 0.396 Gapped Lambda K H 0.267 0.0487 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 6,368,584 Number of extensions: 414577 Number of successful extensions: 1302 Number of sequences better than 10.0: 1 Number of HSP's gapped: 923 Number of HSP's successfully gapped: 73 Length of query: 384 Length of database: 5,994,473 Length adjustment: 95 Effective length of query: 289 Effective length of database: 3,941,713 Effective search space: 1139155057 Effective search space used: 1139155057 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 58 (26.7 bits)