RPSBLAST alignment of GI: 254780638 and protein with PDBid: 1faf
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79
Score = 84.6 bits (209), Expect = 3e-17
Identities = 9/71 (12%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 2 KKADFYQVLGIDRN--ATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRD 59
K ++L + R +++ A++ ++ HPD+ + +++ + +
Sbjct: 9 DKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSH----ALMQELNSLWGTFKT 64
Query: 60 PQKRALYDQGG 70
+ GG
Sbjct: 65 EVYNLRMNLGG 75