RPSBLAST alignment of GI: 254780638 and protein with PDBid: 3lz8
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein structure initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329
Score = 269 bits (689), Expect = 7e-73
Identities = 100/371 (26%), Positives = 162/371 (43%), Gaps = 68/371 (18%)
Query: 1 MKKADFYQVLGIDRNATDRQLKTAFRSLAMKYHPDQNRNDPEAKEKFAQISEAYEVLRDP 60
M+ D+Y +LG+ + +KTA+R LA KYHPD + + +A+ KF ++EA+EVL+D
Sbjct: 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVS-KENDAEAKFKDLAEAWEVLKDE 83
Query: 61 QKRALYDQGGHEALEYGAQSQGAGGFGAGMYGNSDFSELFEGIFGGIMGSGRSYKRSSST 120
Q+RA YDQ + G Q Y DF ++F +FG ++++R
Sbjct: 84 QRRAEYDQLWQHRNDPGFGRQRQTHE--QSYSQQDFDDIFSSMFG-----QQAHQRRRQH 136
Query: 121 GEAGADLRYNLEISLEEAFSGKTVQIRFPTAVKCSTCSGSGAKPGTNPMDCNICNGSGRV 180
G DL + + LEE + + T + + N
Sbjct: 137 AARGHDLEIEVAVFLEETLAE---------------------QTRTISYNLPVYNV---- 171
Query: 181 YTTAQSFFSIERACSTCRGSGQIIPHPCSKCHGQGRVSEEKLLSVNVPPGVDDGTRIRLS 240
G K L+V +P GV DG RIRL
Sbjct: 172 -------------------------------FGMIESETPKTLNVKIPAGVVDGQRIRLK 200
Query: 241 GEGGAGVYGGAPGDLYIFISVKKHQFFKRDGADLYCTVPISIVTVAMGGTFDVATLDATH 300
G+G G GG GDL++ I + H F G +L +P++ A+G V TL +
Sbjct: 201 GQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESI 260
Query: 301 SRVTIPEGTQTGKQFRLKGKGMPVINSGRKGDLYVQVQVETPQKLNKRQRELLEEFEQIS 360
+T+P G+Q G++ R+KGKG+ + GDL+ +++ P K +++ REL ++
Sbjct: 261 -LLTVPPGSQAGQRLRIKGKGLV--SKTHTGDLFAVIKIVMPTKPDEKARELWQQLAAAE 317
Query: 361 SQDNNPQSTGF 371
+ +P+ T
Sbjct: 318 A-SFDPRKTWG 327