HHsearch alignment for GI: 254780640 and conserved domain: COG0178

>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair].

Probab=91.82  E-value=0.44  Score=25.20  Aligned_cols=51  Identities=24%  Similarity=0.351  Sum_probs=36.0

Q ss_pred             CEEEEEEEEEEEECEECCCCCEEEECCCCEEEEEECCCCCHHHHH-----HHHHHHHCC
Q ss_conf             101689989999540136831799868986999907986578999-----999998579
Q gi|254780640|r   23 RKLIFKLLDIEISHFRGFTEIQKIEFADHLTIVNGQNGYGKSSLS-----EAIEWLFYG   76 (110)
Q Consensus        23 ~~~~~kl~~i~i~nFr~f~~~~~i~f~~~~~~i~G~Ng~GKStil-----~ai~~~l~g   76 (110)
T Consensus       603 ~~~~L~l~gA~~nNLkni-~-v~iPLg~-~t~VTGVSGSGKSTLIn~tL~~a~~~~l~~  658 (935)
T COG0178         603 NGKWLELKGARRNNLKNI-D-VEIPLGV-FTCVTGVSGSGKSTLINDTLVPALARHLNG  658 (935)
T ss_pred             CCCEEEEECCCCCCCCCC-E-EECCCCC-EEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf             998699804641474663-0-5511663-799983687877786999999999998634