HHsearch alignment for GI: 254780640 and conserved domain: PRK13853
>PRK13853 type IV secretion system protein VirB4; Provisional.
Probab=95.78 E-value=0.013 Score=32.87 Aligned_cols=29 Identities=24% Similarity=0.186 Sum_probs=23.1
Q ss_pred EECC---CCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9868---9869999079865789999999985
Q gi|254780640|r 46 IEFA---DHLTIVNGQNGYGKSSLSEAIEWLF 74 (110)
Q Consensus 46 i~f~---~~~~~i~G~Ng~GKStil~ai~~~l 74 (110)
T Consensus 419 fn~H~~d~GHt~I~G~TGsGKTtll~fL~aq~ 450 (789)
T PRK13853 419 YIPHEHDVGMTAIFGPIGRGKTTLMTFILAML 450 (789)
T ss_pred EECCCCCCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 63787887744887899998899999999999