HHsearch alignment for GI: 254780640 and conserved domain: TIGR01846
>TIGR01846 type_I_sec_HlyB type I secretion system ATPase; InterPro: IPR010132 Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This entry contains one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N terminus, but rather carry signals located toward the extreme C terminus to direct type I secretion.; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015031 protein transport, 0016021 integral to membrane.
Probab=91.45 E-value=0.22 Score=26.74 Aligned_cols=27 Identities=26% Similarity=0.431 Sum_probs=23.4
Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 869999079865789999999985797
Q gi|254780640|r 51 HLTIVNGQNGYGKSSLSEAIEWLFYGY 77 (110)
Q Consensus 51 ~~~~i~G~Ng~GKStil~ai~~~l~g~ 77 (110)
T Consensus 492 e~IGIvGpSGSGKSTLTKL~QRLYtP~ 518 (703)
T TIGR01846 492 EVIGIVGPSGSGKSTLTKLLQRLYTPE 518 (703)
T ss_pred EEEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 579987278986789999988614888