HHsearch alignment for GI: 254780640 and conserved domain: TIGR03499
>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=91.14 E-value=0.28 Score=26.18 Aligned_cols=25 Identities=16% Similarity=0.405 Sum_probs=19.9
Q ss_pred CCEEEEEECCCCCHHHHHHHHH--HHH
Q ss_conf 9869999079865789999999--985
Q gi|254780640|r 50 DHLTIVNGQNGYGKSSLSEAIE--WLF 74 (110)
Q Consensus 50 ~~~~~i~G~Ng~GKStil~ai~--~~l 74 (110)
T Consensus 194 ~~vi~lvGPTGVGKTTTiAKLAa~~~l 220 (282)
T TIGR03499 194 GGVIALVGPTGVGKTTTLAKLAARFVL 220 (282)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 727999778887578899999999999