HHsearch alignment for GI: 254780640 and conserved domain: cd00267
>cd00267 ABC_ATPase ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.72 E-value=4.6e-05 Score=45.11 Aligned_cols=32 Identities=31% Similarity=0.434 Sum_probs=26.5
Q ss_pred EEEECCC-CEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 7998689-8699990798657899999999857
Q gi|254780640|r 44 QKIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFY 75 (110)
Q Consensus 44 ~~i~f~~-~~~~i~G~Ng~GKStil~ai~~~l~ 75 (110)
T Consensus 18 i~~~i~~Ge~~~i~G~nGaGKSTLl~~l~gl~~ 50 (157)
T cd00267 18 VSLTLKAGEIVALVGPNGSGKSTLLRAIAGLLK 50 (157)
T ss_pred EEEEECCCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 178987997999987889998999999958847