HHsearch alignment for GI: 254780640 and conserved domain: cd01131
>cd01131 PilT Pilus retraction ATPase PilT. PilT is a nucleotide binding protein responsible for the retraction of type IV pili, likely by pili disassembly. This retraction provides the force required for travel of bacteria in low water environments by a mechanism known as twitching motility.
Probab=95.44 E-value=0.014 Score=32.71 Aligned_cols=25 Identities=32% Similarity=0.384 Sum_probs=21.7
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 9869999079865789999999985
Q gi|254780640|r 50 DHLTIVNGQNGYGKSSLSEAIEWLF 74 (110)
Q Consensus 50 ~~~~~i~G~Ng~GKStil~ai~~~l 74 (110)
T Consensus 1 ~GliLitG~TGSGKTTtl~all~~i 25 (198)
T cd01131 1 RGLVLVTGPTGSGKSTTLAAMIDYI 25 (198)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 9389998999997999999999853