HHsearch alignment for GI: 254780640 and conserved domain: cd03223
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=97.35 E-value=0.00041 Score=40.35 Aligned_cols=30 Identities=33% Similarity=0.495 Sum_probs=23.2
Q ss_pred EEECCC-CEEEEEECCCCCHHHHHHHHHHHH
Q ss_conf 998689-869999079865789999999985
Q gi|254780640|r 45 KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLF 74 (110)
Q Consensus 45 ~i~f~~-~~~~i~G~Ng~GKStil~ai~~~l 74 (110)
T Consensus 21 sl~i~~Ge~v~i~G~sGsGKSTLl~~l~Gl~ 51 (166)
T cd03223 21 SFEIKPGDRLLITGPSGTGKSSLFRALAGLW 51 (166)
T ss_pred EEEECCCCEEEEECCCCCCHHHHHHHHCCCC
T ss_conf 8898899999999589998899999986987