>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=97.18  E-value=0.00098  Score=38.46  Aligned_cols=31  Identities=26%  Similarity=0.339  Sum_probs=25.1

Q ss_pred             EEECCC-CEEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf             998689-8699990798657899999999857
Q gi|254780640|r   45 KIEFAD-HLTIVNGQNGYGKSSLSEAIEWLFY   75 (110)
Q Consensus        45 ~i~f~~-~~~~i~G~Ng~GKStil~ai~~~l~   75 (110)
T Consensus        20 s~~i~~Ge~~~ivGpSG~GKSTllr~i~Gl~~   51 (178)
T cd03229          20 SLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE   51 (178)
T ss_pred             EEEECCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf             76988998999999999839999999985999