HHsearch alignment for GI: 254780640 and conserved domain: cd03230
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=97.70 E-value=0.00011 Score=43.21 Aligned_cols=32 Identities=25% Similarity=0.277 Sum_probs=26.0
Q ss_pred EEEECCCC-EEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf 79986898-699990798657899999999857
Q gi|254780640|r 44 QKIEFADH-LTIVNGQNGYGKSSLSEAIEWLFY 75 (110)
Q Consensus 44 ~~i~f~~~-~~~i~G~Ng~GKStil~ai~~~l~ 75 (110)
T Consensus 19 vsl~i~~Gei~gl~G~NGaGKSTLl~~i~Gl~~ 51 (173)
T cd03230 19 ISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK 51 (173)
T ss_pred EEEEECCCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 087887993999987899799999999976857