HHsearch alignment for GI: 254780640 and conserved domain: pfam08298
>pfam08298 AAA_PrkA PrkA AAA domain. This is a family of PrkA bacterial and archaeal serine kinases approximately 630 residues long. This is the N-terminal AAA domain.
Probab=94.73 E-value=0.032 Score=30.86 Aligned_cols=29 Identities=31% Similarity=0.324 Sum_probs=23.9
Q ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 89869999079865789999999985797
Q gi|254780640|r 49 ADHLTIVNGQNGYGKSSLSEAIEWLFYGY 77 (110)
Q Consensus 49 ~~~~~~i~G~Ng~GKStil~ai~~~l~g~ 77 (110)
T Consensus 84 ~kqIllL~GPVGsGKSsl~e~LK~glE~y 112 (358)
T pfam08298 84 RKQILYLLGPVGGGKSSLAERLKKLLELV 112 (358)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 10589997789877589999999872058