HHsearch alignment for GI: 254780640 and conserved domain: pfam08298

>pfam08298 AAA_PrkA PrkA AAA domain. This is a family of PrkA bacterial and archaeal serine kinases approximately 630 residues long. This is the N-terminal AAA domain.
Probab=94.73  E-value=0.032  Score=30.86  Aligned_cols=29  Identities=31%  Similarity=0.324  Sum_probs=23.9

Q ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf             89869999079865789999999985797
Q gi|254780640|r   49 ADHLTIVNGQNGYGKSSLSEAIEWLFYGY   77 (110)
Q Consensus        49 ~~~~~~i~G~Ng~GKStil~ai~~~l~g~   77 (110)
T Consensus        84 ~kqIllL~GPVGsGKSsl~e~LK~glE~y  112 (358)
T pfam08298        84 RKQILYLLGPVGGGKSSLAERLKKLLELV  112 (358)
T ss_pred             CEEEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf             10589997789877589999999872058