HHsearch alignment for GI: 254780640 and conserved domain: smart00763

>smart00763 AAA_PrkA PrkA AAA domain. This is a family of PrkA bacterial and archaeal serine kinases approximately 630 residues long. This is the N-terminal AAA domain.
Probab=95.90  E-value=0.0086  Score=33.72  Aligned_cols=27  Identities=30%  Similarity=0.321  Sum_probs=23.3

Q ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf             986999907986578999999998579
Q gi|254780640|r   50 DHLTIVNGQNGYGKSSLSEAIEWLFYG   76 (110)
Q Consensus        50 ~~~~~i~G~Ng~GKStil~ai~~~l~g   76 (110)
T Consensus        78 k~IllL~GPvGsGKStl~~~Lk~~lE~  104 (361)
T smart00763       78 KQILYLLGPVGGGKSSLVECLKRGLEE  104 (361)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf             569999889988779999999999998