HHsearch alignment for GI: 254780640 and conserved domain: smart00763
>smart00763 AAA_PrkA PrkA AAA domain. This is a family of PrkA bacterial and archaeal serine kinases approximately 630 residues long. This is the N-terminal AAA domain.
Probab=95.90 E-value=0.0086 Score=33.72 Aligned_cols=27 Identities=30% Similarity=0.321 Sum_probs=23.3
Q ss_pred CCEEEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf 986999907986578999999998579
Q gi|254780640|r 50 DHLTIVNGQNGYGKSSLSEAIEWLFYG 76 (110)
Q Consensus 50 ~~~~~i~G~Ng~GKStil~ai~~~l~g 76 (110)
T Consensus 78 k~IllL~GPvGsGKStl~~~Lk~~lE~ 104 (361)
T smart00763 78 KQILYLLGPVGGGKSSLVECLKRGLEE 104 (361)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 569999889988779999999999998