Query gi|254780646|ref|YP_003065059.1| 50S ribosomal protein L21 [Candidatus Liberibacter asiaticus str. psy62] Match_columns 103 No_of_seqs 103 out of 1616 Neff 5.4 Searched_HMMs 23785 Date Tue May 31 18:29:38 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780646.hhm -d /home/congqian_1/database/pdb/pdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 3ofq_R 50S ribosomal protein L 100.0 8.7E-43 0 258.4 5.8 103 1-103 1-103 (103) 2 3bbo_T Ribosomal protein L21; 100.0 1.1E-42 0 257.7 -0.6 102 1-102 124-226 (257) 3 2j01_V 50S ribosomal protein L 100.0 6.6E-40 2.8E-44 242.3 -0.6 100 1-102 1-100 (101) 4 2zjr_O 50S ribosomal protein L 100.0 1.3E-38 5.3E-43 235.1 5.4 99 1-102 1-99 (100) 5 2out_A MU-like prophage flumu 98.6 7.3E-09 3.1E-13 68.9 2.4 37 65-102 2-38 (131) 6 3cew_A Uncharacterized cupin p 46.8 15 0.00065 16.9 3.4 23 3-25 59-81 (125) 7 2arc_A ARAC, arabinose operon 43.4 18 0.00074 16.5 4.0 23 3-25 49-71 (164) 8 2gu9_A Tetracenomycin polyketi 32.5 27 0.0011 15.5 3.6 23 3-25 55-77 (113) 9 1yhf_A Hypothetical protein SP 30.7 29 0.0012 15.4 3.8 22 3-24 71-92 (115) 10 1b5f_B Protein (cardosin A); h 27.1 19 0.00078 16.4 1.2 56 4-62 17-75 (87) 11 3jzv_A Uncharacterized protein 25.2 36 0.0015 14.8 4.0 23 3-25 84-106 (166) 12 2pfw_A Cupin 2, conserved barr 24.4 38 0.0016 14.7 4.0 22 3-24 65-86 (116) 13 2ivw_A PILP pilot protein; lip 23.6 39 0.0016 14.6 3.3 38 1-38 39-78 (113) 14 1sfn_A Conserved hypothetical 22.3 41 0.0017 14.5 3.8 21 3-23 79-99 (246) 15 1rc6_A Hypothetical protein YL 22.1 42 0.0018 14.5 2.5 22 3-24 92-113 (261) No 1 >3ofq_R 50S ribosomal protein L21; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 1vs8_R 1vs6_R 2aw4_R 2awb_R 1vt2_R 2i2v_R 2j28_R 2i2t_R* 2qao_R* 2qba_R* 2qbc_R* 2qbe_R 2qbg_R 2qbi_R* 2qbk_R* 2qov_R 2qox_R 2qoz_R* 2qp1_R* 2rdo_R ... Probab=100.00 E-value=8.7e-43 Score=258.35 Aligned_cols=103 Identities=42% Similarity=0.700 Sum_probs=101.8 Q ss_pred CEEEEEECCEEEEECCCCEEEEECCCCCCCCCEEHHHEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCEEEEEECCC Q ss_conf 96799999888897699899982446789972130421453068851226743378679999996345673899996388 Q gi|254780646|r 1 MFAIIEHGGKQSRVSATDTITVEKIVAKDGDNIRFDNVLAVGKDEHLSVGTPRVEGAYVEAEVVKQLRTKKVVVFKKRRR 80 (103) Q Consensus 1 MyAIi~~gGkQykV~~Gd~l~v~~l~~~~G~~i~l~~VL~~~~~~~~~iG~P~l~~a~V~a~V~~~~k~~Ki~vfK~krR 80 (103) |||||++||+||||++||+|.+|++++++||+++|++|||+++++++.+|+|+|+||+|+|+|++|.||+||++|||||| T Consensus 1 MyAIi~~gGkQykV~~gd~l~v~~l~~~~G~~i~l~~VLl~~~~~~~~iG~P~l~~a~V~a~V~~~~k~~Ki~vfK~krr 80 (103) T 3ofq_R 1 MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRR 80 (103) T ss_dssp CCCCEECSSSEECCCSSCCEEEECCSCCTTCEEEECCBSCCCTTSCCCCSSSSCSSCEEEEEEEEEEECCCCCEECCBTT T ss_pred CEEEEEECCEEEEECCCCEEEEECCCCCCCCEEEEHHHEECCCCCCEEECCCCCCCCEEEEEEEECCCCCCEEEEEECCC T ss_conf 99999979999999389999993568899999997454691699847989855467699999974057872189996387 Q ss_pred CCCEEECCCCCCCEEEEEEEEEC Q ss_conf 87166427457600999967619 Q gi|254780646|r 81 QNYRRTHGHRQEMTVVRITSIVT 103 (103) Q Consensus 81 K~yrr~~GhRq~~T~ikI~~I~s 103 (103) |||+|++||||+||+|+|++|.+ T Consensus 81 k~y~r~~GHRQ~~T~ikI~~I~a 103 (103) T 3ofq_R 81 KHYRKQQGHRQWFTDVKITGISA 103 (103) T ss_dssp TTBCCEECCCCEEEEECCCEEEC T ss_pred CCCCCCCCCCCCCEEEEEEEEEC T ss_conf 77342576378827999998879 No 2 >3bbo_T Ribosomal protein L21; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} Probab=100.00 E-value=1.1e-42 Score=257.70 Aligned_cols=102 Identities=39% Similarity=0.573 Sum_probs=100.0 Q ss_pred CEEEEEECCEEEEECCCCEEEEECCC-CCCCCCEEHHHEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCEEEEEECC Q ss_conf 96799999888897699899982446-78997213042145306885122674337867999999634567389999638 Q gi|254780646|r 1 MFAIIEHGGKQSRVSATDTITVEKIV-AKDGDNIRFDNVLAVGKDEHLSVGTPRVEGAYVEAEVVKQLRTKKVVVFKKRR 79 (103) Q Consensus 1 MyAIi~~gGkQykV~~Gd~l~v~~l~-~~~G~~i~l~~VL~~~~~~~~~iG~P~l~~a~V~a~V~~~~k~~Ki~vfK~kr 79 (103) |||||++||+||||++||+|.||+|. .++||.|+|++|||+++++++.+|+|+|+||+|+|+|++|+||+||++||||| T Consensus 124 MYAII~igGKQYkV~~Gd~i~V~kL~~~e~Gd~I~l~~VLlv~~~~~~~iG~P~l~~a~V~A~Vle~~kg~KviVfK~Kr 203 (257) T 3bbo_T 124 IFAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNKVLLVGTKASTYIGTPIVTNAAVHAVVEEQLLDDKVIVFKYKK 203 (257) T ss_dssp CCCCCCSSSCCCCCCTTCCCCCCCCTTSCTTCEEECTTCCCBCSSSCBCCSSSSCSSCCCEEECCCCCCCSCCCEEECCT T ss_pred EEEEEEECCEEEEECCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCEEECCCCCCCCEEEEEEEEECCCCCEEEEEECC T ss_conf 69999989999998389999980678999999899733599848996587886567758999997304678679999369 Q ss_pred CCCCEEECCCCCCCEEEEEEEEE Q ss_conf 88716642745760099996761 Q gi|254780646|r 80 RQNYRRTHGHRQEMTVVRITSIV 102 (103) Q Consensus 80 RK~yrr~~GhRq~~T~ikI~~I~ 102 (103) ||||||++||||+||+|+|++|. T Consensus 204 RK~yrRk~GHRQ~~T~IkI~~I~ 226 (257) T 3bbo_T 204 KKNYRRNIGHRQPITRIKITGIT 226 (257) T ss_dssp TTTCCEEECCCCCCCCCCCCCCC T ss_pred CCCCCCCCCCCCCCEEEEEEEEE T ss_conf 98753678717781699997986 No 3 >2j01_V 50S ribosomal protein L21; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} SCOP: b.155.1.1 PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ... Probab=100.00 E-value=6.6e-40 Score=242.26 Aligned_cols=100 Identities=44% Similarity=0.582 Sum_probs=94.9 Q ss_pred CEEEEEECCEEEEECCCCEEEEECCCCCCCCCEEHHHEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCEEEEEECCC Q ss_conf 96799999888897699899982446789972130421453068851226743378679999996345673899996388 Q gi|254780646|r 1 MFAIIEHGGKQSRVSATDTITVEKIVAKDGDNIRFDNVLAVGKDEHLSVGTPRVEGAYVEAEVVKQLRTKKVVVFKKRRR 80 (103) Q Consensus 1 MyAIi~~gGkQykV~~Gd~l~v~~l~~~~G~~i~l~~VL~~~~~~~~~iG~P~l~~a~V~a~V~~~~k~~Ki~vfK~krR 80 (103) |||||++||+||||++||+|.+|++++++|+.++|+.+|+. ++++.+|+|+|+||+|+|+|++|.+|+||++|||||| T Consensus 1 MyAIi~~gGkQykV~~Gd~i~v~~l~~~~G~~i~~~~vl~~--~~~~~iG~P~l~~a~V~a~Vl~~~k~~Kv~vfK~krR 78 (101) T 2j01_V 1 MFAIVKTGGKQYRVEPGLKLRVEKLDAEPGATVELPVLLLG--GEKTVVGTPVVEGASVVAEVLGHGRGKKILVSKFKAK 78 (101) T ss_dssp CCCEEEETTEEEECCSSCCCCCCCCSCCSSSCCBCCCCSCC--CSSTTCCCCCGGGCSSCCCCEECCCCCCCCCCCCCEE T ss_pred CEEEEEECCEEEEECCCCEEEEECCCCCCCCEEEEEEEEEC--CCCEEECCCCCCCCEEEEEEEEECCCCCEEEEEECCC T ss_conf 99999979999999599999991438789999999999996--8826888965777699999997348894999996698 Q ss_pred CCCEEECCCCCCCEEEEEEEEE Q ss_conf 8716642745760099996761 Q gi|254780646|r 81 QNYRRTHGHRQEMTVVRITSIV 102 (103) Q Consensus 81 K~yrr~~GhRq~~T~ikI~~I~ 102 (103) |+|||++||||+||+|+|++|. T Consensus 79 K~y~r~~GHRQ~~T~v~I~~I~ 100 (101) T 2j01_V 79 VQYRRKKGHRQPYTELLIKEIR 100 (101) T ss_dssp CCCCEECCCCCCCCCCCCEECC T ss_pred CCCCCCCCCCCCCEEEEEEEEE T ss_conf 8854678507882799998767 No 4 >2zjr_O 50S ribosomal protein L21; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: b.155.1.1 PDB: 1nwx_P* 1nwy_P* 1pnu_P 1pny_P 1sm1_P* 1vor_S 1vou_S 1vow_S 1voy_S 1vp0_S 1xbp_P* 1yl3_2 2b66_V 2b9n_V 2b9p_V 2zjp_O* 2zjq_O 1nkw_P 3cf5_O* 3dll_O* Probab=100.00 E-value=1.3e-38 Score=235.13 Aligned_cols=99 Identities=39% Similarity=0.550 Sum_probs=92.5 Q ss_pred CEEEEEECCEEEEECCCCEEEEECCCCCCCCCEEHHHEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCEEEEEECCC Q ss_conf 96799999888897699899982446789972130421453068851226743378679999996345673899996388 Q gi|254780646|r 1 MFAIIEHGGKQSRVSATDTITVEKIVAKDGDNIRFDNVLAVGKDEHLSVGTPRVEGAYVEAEVVKQLRTKKVVVFKKRRR 80 (103) Q Consensus 1 MyAIi~~gGkQykV~~Gd~l~v~~l~~~~G~~i~l~~VL~~~~~~~~~iG~P~l~~a~V~a~V~~~~k~~Ki~vfK~krR 80 (103) |||||++||+||||++||+|.||++++++|+.++|+.||+. ++ ..+|.|++++|+|+|+|++|++++|+++|||||| T Consensus 1 MyAIi~~gGKQykV~~Gd~l~ve~l~~~~G~~i~~~~vl~~--g~-~~~~~~~~~~a~V~a~V~~~~k~~Ki~v~K~krr 77 (100) T 2zjr_O 1 MFAIIQTGGKQYRVSEGDVIRVESLQGEAGDKVELKALFVG--GE-QTVFGEDAGKYTVQAEVVEHGRGKKIYIRKYKSG 77 (100) T ss_dssp ----CCSSCCSCCSCCEEEEECCSCCSSCCEEEECCSCEET--TS-CEECSSTTTTSCEEEEEEECCBCCCEEEEEECSS T ss_pred CEEEEEECCEEEEECCCCEEEEECCCCCCCCEEEEEEEEEC--CC-CEEECCCCCEEEEEEEEECCCCCCEEEEEEECCC T ss_conf 98999979999999589999992468889999999987873--87-2282788844699999980146887999995287 Q ss_pred CCCEEECCCCCCCEEEEEEEEE Q ss_conf 8716642745760099996761 Q gi|254780646|r 81 QNYRRTHGHRQEMTVVRITSIV 102 (103) Q Consensus 81 K~yrr~~GhRq~~T~ikI~~I~ 102 (103) |||||++||||+||+|+|++|. T Consensus 78 K~yrr~~GHRQ~~T~i~I~~I~ 99 (100) T 2zjr_O 78 VQYRRRTGHRQNFTAIKILGIQ 99 (100) T ss_dssp SCCEEEEEECCBEEEEECCCC- T ss_pred CCCCCCCCCCCCEEEEEEEEEE T ss_conf 7732577427880799998676 No 5 >2out_A MU-like prophage flumu protein GP35, protein HI1507 in MU-like prophage flumu region...; structural genomics, hypothetical protein; NMR {Haemophilus influenzae} SCOP: a.140.3.2 d.344.1.1 Probab=98.65 E-value=7.3e-09 Score=68.93 Aligned_cols=37 Identities=16% Similarity=0.322 Sum_probs=34.7 Q ss_pred ECCCCCCEEEEEECCCCCCEEECCCCCCCEEEEEEEEE Q ss_conf 63456738999963888716642745760099996761 Q gi|254780646|r 65 KQLRTKKVVVFKKRRRQNYRRTHGHRQEMTVVRITSIV 102 (103) Q Consensus 65 ~~~k~~Ki~vfK~krRK~yrr~~GhRq~~T~ikI~~I~ 102 (103) .|.+++|+++|+.|||+||| ++||||.++++.|.+|. T Consensus 2 sHlk~dkvIVfkkKrrkGYR-rnGh~q~l~e~~i~~i~ 38 (131) T 2out_A 2 SHMDKTFCVVVQNRIKEGYR-RAGFSFHLGDNSLAAVS 38 (131) T ss_dssp CCSSCCBCEEEECCSCSCCC-CSSSCCCSSEEECCCBS T ss_pred CCCCCCEEEEEEECCCCHHH-HCCHHHHHHHHHHHHHH T ss_conf 76668768998733630475-50156631488899998 No 6 >3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, PSI-2, protein structure initiative; 2.31A {Bacteroides fragilis nctc 9343} Probab=46.77 E-value=15 Score=16.88 Aligned_cols=23 Identities=17% Similarity=0.248 Sum_probs=20.0 Q ss_pred EEEEECCEEEEECCCCEEEEECC Q ss_conf 79999988889769989998244 Q gi|254780646|r 3 AIIEHGGKQSRVSATDTITVEKI 25 (103) Q Consensus 3 AIi~~gGkQykV~~Gd~l~v~~l 25 (103) +.+..+|+.+.+++||.+.++.- T Consensus 59 ~~~~v~g~~~~l~~Gd~i~vp~g 81 (125) T 3cew_A 59 GFITIDGEKIELQAGDWLRIAPD 81 (125) T ss_dssp EEEEETTEEEEEETTEEEEECTT T ss_pred EEEEECCEEEEEECCEEEEECCC T ss_conf 99999999999338869998998 No 7 >2arc_A ARAC, arabinose operon regulatory protein; transcription factor, carbohydrate binding, coiled-coil, jelly roll; HET: ARA; 1.50A {Escherichia coli} SCOP: b.82.4.1 PDB: 2aac_A* 1xja_A 2ara_A Probab=43.37 E-value=18 Score=16.55 Aligned_cols=23 Identities=9% Similarity=0.196 Sum_probs=20.2 Q ss_pred EEEEECCEEEEECCCCEEEEECC Q ss_conf 79999988889769989998244 Q gi|254780646|r 3 AIIEHGGKQSRVSATDTITVEKI 25 (103) Q Consensus 3 AIi~~gGkQykV~~Gd~l~v~~l 25 (103) +.+.++|++|.+.+||.+.++.- T Consensus 49 g~~~i~g~~y~l~~Gdl~li~P~ 71 (164) T 2arc_A 49 GVVKNQGREFVCRPGDILLFPPG 71 (164) T ss_dssp EEEEETTEEEEECTTCEEEECTT T ss_pred EEEEECCEEEEECCCEEEEECCC T ss_conf 99999999999569909997799 No 8 >2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A Probab=32.48 E-value=27 Score=15.55 Aligned_cols=23 Identities=17% Similarity=0.164 Sum_probs=19.6 Q ss_pred EEEEECCEEEEECCCCEEEEECC Q ss_conf 79999988889769989998244 Q gi|254780646|r 3 AIIEHGGKQSRVSATDTITVEKI 25 (103) Q Consensus 3 AIi~~gGkQykV~~Gd~l~v~~l 25 (103) +.+.++|+.+.+.+||.+.++.- T Consensus 55 ~~~~~~g~~~~l~~Gd~~~ip~~ 77 (113) T 2gu9_A 55 GEAIVDGHTQALQAGSLIAIERG 77 (113) T ss_dssp EEEEETTEEEEECTTEEEEECTT T ss_pred EEEEECCEEEEECCCCEEECCCC T ss_conf 99987998798059962786998 No 9 >1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 2.00A {Streptococcus pyogenes m1 gas} SCOP: b.82.1.9 Probab=30.71 E-value=29 Score=15.38 Aligned_cols=22 Identities=27% Similarity=0.244 Sum_probs=15.2 Q ss_pred EEEEECCEEEEECCCCEEEEEC Q ss_conf 7999998888976998999824 Q gi|254780646|r 3 AIIEHGGKQSRVSATDTITVEK 24 (103) Q Consensus 3 AIi~~gGkQykV~~Gd~l~v~~ 24 (103) +.+.++|+.+.+.+||.+.++. T Consensus 71 ~~~~~~~~~~~l~~Gd~~~vp~ 92 (115) T 1yhf_A 71 AEITIDQETYRVAEGQTIVMPA 92 (115) T ss_dssp EEEEETTEEEEEETTCEEEECT T ss_pred EEEEEEEEEEECCCCCEEEECC T ss_conf 9999986899815996999899 No 10 >1b5f_B Protein (cardosin A); hydrolase(aspartic proteinase),; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Probab=27.13 E-value=19 Score=16.42 Aligned_cols=56 Identities=11% Similarity=-0.041 Sum_probs=32.4 Q ss_pred EEEECCEEEEECCCCEEEEECCCCCCCCCEEHHHEEEE---ECCCCCEECCCCCCCCEEEEE Q ss_conf 99999888897699899982446789972130421453---068851226743378679999 Q gi|254780646|r 4 IIEHGGKQSRVSATDTITVEKIVAKDGDNIRFDNVLAV---GKDEHLSVGTPRVEGAYVEAE 62 (103) Q Consensus 4 Ii~~gGkQykV~~Gd~l~v~~l~~~~G~~i~l~~VL~~---~~~~~~~iG~P~l~~a~V~a~ 62 (103) .+.+||+.|.+.+.+.+.-.... +...-.-.+... ..+....+|.|++.++.+.-. T Consensus 17 ~F~~~g~~~~i~p~~yi~~~~~~---~~~~c~~~~~~~~~~~~~~~~ILGd~Flr~~y~vfD 75 (87) T 1b5f_B 17 SFTIGGKKFGLTPEQYILKVGKG---EATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFD 75 (87) T ss_dssp EEEETTEEEEECHHHHEEEESCT---TTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEE T ss_pred EEEECCEEEEECHHHEEEEECCC---CCEEEEEEEEECCCCCCCCCEEECHHHHCCEEEEEE T ss_conf 99999999998869829885269---920656778977889898518971663516999998 No 11 >3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, protein structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum atcc 11170} Probab=25.17 E-value=36 Score=14.81 Aligned_cols=23 Identities=22% Similarity=0.153 Sum_probs=19.6 Q ss_pred EEEEECCEEEEECCCCEEEEECC Q ss_conf 79999988889769989998244 Q gi|254780646|r 3 AIIEHGGKQSRVSATDTITVEKI 25 (103) Q Consensus 3 AIi~~gGkQykV~~Gd~l~v~~l 25 (103) +.+.++|+.|.+.+||.+.++.- T Consensus 84 g~~~~~g~~~~l~~Gd~i~ip~~ 106 (166) T 3jzv_A 84 GHAMVGRAVSAVAPYDLVTIPGW 106 (166) T ss_dssp EEEEETTEEEEECTTCEEEECTT T ss_pred EEEEECCEEEEECCCCEEEECCC T ss_conf 67998757789269979998999 No 12 >2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina ncimb 400} Probab=24.35 E-value=38 Score=14.72 Aligned_cols=22 Identities=18% Similarity=0.163 Sum_probs=17.9 Q ss_pred EEEEECCEEEEECCCCEEEEEC Q ss_conf 7999998888976998999824 Q gi|254780646|r 3 AIIEHGGKQSRVSATDTITVEK 24 (103) Q Consensus 3 AIi~~gGkQykV~~Gd~l~v~~ 24 (103) +.+.++|+.+.+.+||.+.++. T Consensus 65 ~~~~~~g~~~~l~~Gd~~~ip~ 86 (116) T 2pfw_A 65 FHVNVDGVIKVLTAGDSFFVPP 86 (116) T ss_dssp EEEEETTEEEEECTTCEEEECT T ss_pred EEEEECCEEEEECCCCEEEECC T ss_conf 9999899999975984999896 No 13 >2ivw_A PILP pilot protein; lipoprotein, pilus biogenesis, secretin; NMR {Neisseria meningitidis} Probab=23.60 E-value=39 Score=14.64 Aligned_cols=38 Identities=18% Similarity=0.263 Sum_probs=24.1 Q ss_pred CEEEEEECCEEEEECCCCEEEEE--CCCCCCCCCEEHHHE Q ss_conf 96799999888897699899982--446789972130421 Q gi|254780646|r 1 MFAIIEHGGKQSRVSATDTITVE--KIVAKDGDNIRFDNV 38 (103) Q Consensus 1 MyAIi~~gGkQykV~~Gd~l~v~--~l~~~~G~~i~l~~V 38 (103) .+|+|...|+=|+|..|+.+=.+ ++-.-..+.|.+.+. T Consensus 39 ~~aLv~pdG~v~~V~~G~yiG~n~GrI~~I~~~~I~l~E~ 78 (113) T 2ivw_A 39 VSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNEL 78 (113) T ss_dssp EEEEEEETTEEEEECSSEEETTTEEEEEEEETTEEEEEEE T ss_pred EEEEEECCCCEEEECCCCEECCCCCEEEEEECCEEEEEEE T ss_conf 8999958998999710888355787999995993999999 No 14 >1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein structure initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11 Probab=22.31 E-value=41 Score=14.49 Aligned_cols=21 Identities=14% Similarity=0.262 Sum_probs=15.9 Q ss_pred EEEEECCEEEEECCCCEEEEE Q ss_conf 799999888897699899982 Q gi|254780646|r 3 AIIEHGGKQSRVSATDTITVE 23 (103) Q Consensus 3 AIi~~gGkQykV~~Gd~l~v~ 23 (103) +.+.++|+.+-+.+||.+.++ T Consensus 79 ~~~~~~g~~~~l~~G~~~~~P 99 (246) T 1sfn_A 79 VDVAVGGETRTLREYDYVYLP 99 (246) T ss_dssp EEEECSSCEEEECTTEEEEEC T ss_pred EEEEECCEEEEEECCCEEEEC T ss_conf 999999999997089999968 No 15 >1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, target T1521, PSI, protein structure initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11 Probab=22.11 E-value=42 Score=14.46 Aligned_cols=22 Identities=14% Similarity=0.074 Sum_probs=19.1 Q ss_pred EEEEECCEEEEECCCCEEEEEC Q ss_conf 7999998888976998999824 Q gi|254780646|r 3 AIIEHGGKQSRVSATDTITVEK 24 (103) Q Consensus 3 AIi~~gGkQykV~~Gd~l~v~~ 24 (103) +.+.++|+.+.+.+||.+.++- T Consensus 92 ~~~~~~g~~~~l~~Gd~~~~p~ 113 (261) T 1rc6_A 92 ITAKAEGKTFALSEGGYLYCPP 113 (261) T ss_dssp EEEEETTEEEEEETTEEEEECT T ss_pred EEEEECCEEEEECCCCEEEECC T ss_conf 9999999999974898999679 Done!