HHSEARCH alignment of GI: 254780646 and SCOP domain: d2qamr1

Alignment

Probab=100.00  E-value=5.7e-43  Score=258.02  Aligned_cols=103  Identities=42%  Similarity=0.700  Sum_probs=101.7

Q ss_pred             CEEEEEECCEEEEECCCCEEEEECCCCCCCCCEEHHHEEEEECCCCCEECCCCCCCCEEEEEEEECCCCCCEEEEEECCC
Q ss_conf             96799999888897699899982446789972130421453068851226743378679999996345673899996388
Q gi|254780646|r    1 MFAIIEHGGKQSRVSATDTITVEKIVAKDGDNIRFDNVLAVGKDEHLSVGTPRVEGAYVEAEVVKQLRTKKVVVFKKRRR   80 (103)
Q Consensus         1 MyAIi~~gGkQykV~~Gd~l~v~~l~~~~G~~i~l~~VL~~~~~~~~~iG~P~l~~a~V~a~V~~~~k~~Ki~vfK~krR   80 (103)
                      |||||++||+||||++||+|.+|++++++||+++|++|||+++++++.+|+|+|+||+|+|+|++|.+|+|+++||||||
T Consensus         1 MyAIi~~gGkQykV~~Gd~i~v~~l~~~~G~~i~~~~VLlv~~~~~~~iG~P~l~~a~V~a~V~~~~k~~Ki~vfK~krr   80 (103)
T d2qamr1           1 MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANGEEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRR   80 (103)
T ss_dssp             CCCCCCSSSSCCCCCSSCCEEESCCCCCTTCEEEECCCSCCCSSSCCCCSSSSCSSCCEEEEEEEEECCCCEEEEEECTT
T ss_pred             CEEEEEECCEEEEECCCCEEEEECCCCCCCCCEEEHHHEECCCCCCEEECCCCCCCCEEEEEEEEECCCCCEEEEEECCC
T ss_conf             98999979999999389999996467788871880462482789827808975236289999953047760899996387


Q ss_pred             CCCEEECCCCCCCEEEEEEEEEC
Q ss_conf             87166427457600999967619
Q gi|254780646|r   81 QNYRRTHGHRQEMTVVRITSIVT  103 (103)
Q Consensus        81 K~yrr~~GhRq~~T~ikI~~I~s  103 (103)
                      |+|+|++||||+||+|+|++|.+
T Consensus        81 k~yrr~~GHRQ~~T~i~I~~I~a  103 (103)
T d2qamr1          81 KHYRKQQGHRQWFTDVKITGISA  103 (103)
T ss_dssp             SSCEEEEEECCCEEEECCCCCCC
T ss_pred             CCCCCCCCCCCCEEEEEEEEEEC
T ss_conf             76324685448728999988869

SCOP domain information

class: All beta proteins
fold: L21p-like
superfamily: L21p-like
family: Ribosomal protein L21p
domain: Ribosomal protein L21p
species: Escherichia coli [TaxId: 562]