HHsearch alignment for GI: 254780647 and conserved domain: PRK05435

>PRK05435 rpmA 50S ribosomal protein L27; Validated.
Probab=100.00  E-value=3e-43  Score=259.36  Aligned_cols=85  Identities=66%  Similarity=1.063  Sum_probs=81.4

Q ss_pred             CCCCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCEEEECCCCEEECCCCEEECCCCEEEECCCCEEEEEEECCCCCCEE
Q ss_conf             96014567606789887425324542781953796899723888937766075686756352256899876368883289
Q gi|254780647|r    1 MAHKKSGGSTQNGRDSAGQRLGLKKSGGQSVIAGNIIIRQRGTRYHPGLNVGLGKDHTIYALVDGHVRFFKKFSKGRAYV   80 (90)
Q Consensus         1 mA~KK~gGStkNgrdS~~krLGvK~~~Gq~V~~G~IivRQRGtk~~PG~nVg~GkD~TLfA~~~G~V~f~~~~~~~r~~V   80 (90)
T Consensus         1 mA~KK~~GStkNgrdS~~krLGvK~~~gq~V~~G~IivRQRGtk~~pG~nVg~GkD~TlfA~~~G~V~F~~-~~~~rk~V   79 (85)
T PRK05435          1 MAHKKGGGSSRNGRDSESKRLGVKRFGGQFVLAGNIIVRQRGTKFHPGVNVGMGKDHTLFALVDGVVKFEK-GKKNRKYV   79 (85)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCEEEEEECCCCCCCCCCEEECCCCCEEEEEEEEEEEEE-CCCCCEEE
T ss_conf             97333666568898898857533836997975883999934772417899888778838982036999999-99999899


Q ss_pred             EEECCC
Q ss_conf             976154
Q gi|254780647|r   81 SVIPKI   86 (90)
Q Consensus        81 ~V~P~~   86 (90)
T Consensus        80 sV~p~~   85 (85)
T PRK05435         80 SVYAAE   85 (85)
T ss_pred             EEEECC
T ss_conf             999697