HHsearch alignment of GI: 254780647 and MMDB domain: 1v8q_A_
>1v8q_A (A:) TT0826; structural genomics, proteomics, riken structural genomics/proteomics initiative, RSGI, translation; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=7.3e-44 Score=262.40 Aligned_cols=85 Identities=58% Similarity=0.913 Sum_probs=82.0
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCEEEECCCCEEECCCCEEECCCCEEEECCCCEEEEEEECCCCCCEE
Q ss_conf 96014567606789887425324542781953796899723888937766075686756352256899876368883289
Q gi|254780647|r 1 MAHKKSGGSTQNGRDSAGQRLGLKKSGGQSVIAGNIIIRQRGTRYHPGLNVGLGKDHTIYALVDGHVRFFKKFSKGRAYV 80 (90)
Q Consensus 1 mA~KK~gGStkNgrdS~~krLGvK~~~Gq~V~~G~IivRQRGtk~~PG~nVg~GkD~TLfA~~~G~V~f~~~~~~~r~~V 80 (90)
|||||++|||+|+|||+|||||||+|+||+|.||+||||||||+||||+||+|||||||||+++|+|+|++. .++|++|
T Consensus 1 mA~KK~~GStkNgrdS~~krLGvK~~~gq~V~~G~IivRQRGtk~hPG~nvg~GkD~TlfAl~~G~V~f~~~-~~~r~~V 79 (85)
T 1v8q_A 1 MAHKKGLGSTRNGRDSQAKRLGVKRYEGQVVRAGNILVRQRGTRFKPGKNVGMGRDFTLFALVDGVVEFQDR-GRLGRYV 79 (85)
T ss_dssp -------------------CCEECSCTTCEECTTCEEEECSSCSSEECTTEEECTTCCEEESSSEEEEEEEC-GGGCEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCEEEEECCCEEECCCCEEECCCCCEEEECCEEEEEEEC-CCCCEEE
T ss_conf 974346678888988998707687059989707838999447718388885156888288840579998594-9997799
Q ss_pred EEECCC
Q ss_conf 976154
Q gi|254780647|r 81 SVIPKI 86 (90)
Q Consensus 81 ~V~P~~ 86 (90)
||+|.+
T Consensus 80 ~V~p~a 85 (85)
T 1v8q_A 80 HVRPLA 85 (85)
T ss_dssp EEEECC
T ss_pred EEEECC
T ss_conf 999789