HHsearch alignment for GI: 254780648 and conserved domain: CHL00189
>CHL00189 infB translation initiation factor 2; Provisional.
Probab=99.50 E-value=1.1e-13 Score=102.71 Aligned_cols=150 Identities=23% Similarity=0.375 Sum_probs=102.9
Q ss_pred EEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEE------CCEEEEEECCCCCCCCCCCCCCCHHHHHH---
Q ss_conf 124421677753035410145401212110000001026632------98689982264212473116775123443---
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE------GYKEFILADIPGIIKNAHQGAGIGDRFLK--- 232 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~------~~~~~~i~D~PGlIegA~~~~glG~~FLr--- 232 (335)
T Consensus 275 VTIMGHVDHGKTsLLD~iR~t~--Va~~EaGGITQhIGAy~V~~~~~~~~~~ITFlDTPG-----He------AFt~MRa 341 (770)
T CHL00189 275 VTILGHVDHGKTTLLDAIRKTN--IAQKEAGGITQKIGAYEVEVPYKDQNQKIVFLDTPG-----HE------AFSSMRS 341 (770)
T ss_pred EEEECCCCCCHHHHHHHHHCCC--CCCCCCCCCCCEECEEEEEECCCCCCCEEEEECCCC-----HH------HHHHHHH
T ss_conf 9985772577203788885288--513456765550352999751578897589955994-----68------8999986
Q ss_pred -HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH------CC--CC
Q ss_conf -3333578875202222110134666789987776675059889999746589988999999999986------29--94
Q gi|254780648|r 233 -HTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ------CG--QV 303 (335)
Q Consensus 233 -hIer~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~------~~--~~ 303 (335)
T Consensus 342 RGA~vTDIvILVVAADDGVmPQTiEAI~h------akaA~VPiIVAINKiDkp~an-~~rVk~eL~e~gli~EewGGd~~ 414 (770)
T CHL00189 342 RGANVTDIAILIVAADDGVKPQTIEAINH------IQAANVPIIVAINKIDKENAN-IDRVKQELSKYNLISEKWGGQTP 414 (770)
T ss_pred CCCCCCCEEEEEEECCCCCCHHHHHHHHH------HHHCCCCEEEEEECCCCCCCC-HHHHHHHHHHCCCCHHHCCCCEE
T ss_conf 27866667999996578856727999999------987699889998774589988-57899999986955222379559
Q ss_pred EEEEECCCCCCHHHHHHHHH--HHHHHHHH
Q ss_conf 89998887889999999999--99985452
Q gi|254780648|r 304 PFEFSSITGHGIPQILECLH--DKIFSIRG 331 (335)
Q Consensus 304 vi~ISA~tg~GI~eL~~~I~--e~L~~~r~ 331 (335)
T Consensus 415 ~V~ISAktg~gId~LLE~IlL~AEvlELkA 444 (770)
T CHL00189 415 MIPISALQGTNIDKLLEMILLLAEIENLQA 444 (770)
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 999661679887999999999987875236