HHsearch alignment for GI: 254780648 and conserved domain: COG0012
>COG0012 Predicted GTPase, probable translation factor [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=2.7e-39 Score=258.05 Aligned_cols=160 Identities=28% Similarity=0.482 Sum_probs=129.7
Q ss_pred CEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEECCE------------------EEEEECCCCCCCCCCC
Q ss_conf 1124421677753035410145401212110000001026632986------------------8998226421247311
Q gi|254780648|r 161 DIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEGYK------------------EFILADIPGIIKNAHQ 222 (335)
Q Consensus 161 DVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~~~------------------~~~i~D~PGlIegA~~ 222 (335)
T Consensus 4 ~~GIVGlPNVGKSTlFnAlT~~~a~~aNYPF~TIePN~Giv~v~d~rl~~L~~~~~c~~k~~~~~ve~vDIAGLV~GAs~ 83 (372)
T COG0012 4 KIGIVGLPNVGKSTLFNALTKAGAEIANYPFCTIEPNVGVVYVPDCRLDELAEIVKCPPKIRPAPVEFVDIAGLVKGASK 83 (372)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCC
T ss_conf 26774189885888999997489642489854265773279647367899987538997477610489982453788546
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCC----------CHHHHHHHHHHHHHHHHHH------------------------
Q ss_conf 677512344333335788752022221----------1013466678998777667------------------------
Q gi|254780648|r 223 GAGIGDRFLKHTERTHVLLHIVSALEE----------NVQAAYQCILDELSAYNSE------------------------ 268 (335)
Q Consensus 223 ~~glG~~FLrhIer~~vLl~VVD~s~~----------d~~~~~~~I~~EL~~y~~~------------------------ 268 (335)
T Consensus 84 GeGLGNkFL~~IRevdaI~hVVr~f~d~di~hv~~~vDP~~DIe~I~~EL~l~d~~~lek~~~k~~k~a~~~~~~~k~~~ 163 (372)
T COG0012 84 GEGLGNKFLDNIREVDAIIHVVRCFGDTDIEHVEGKVDPVEDIEIINTELILWDLESLEKRWERLEKRAKAGKKLDKELK 163 (372)
T ss_pred CCCCCHHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 88864787876551485899998538986547878839277799999999999999999999999988750662379999
Q ss_pred ----------------------------------------HCCCCEEEEEECCCCCCHHH--HHHHHHHHHHHCCCCEEE
Q ss_conf ----------------------------------------50598899997465899889--999999999862994899
Q gi|254780648|r 269 ----------------------------------------LRKKIEIVGLSQIDTVDSDT--LARKKNELATQCGQVPFE 306 (335)
Q Consensus 269 ----------------------------------------L~~Kp~IIVlNKiDl~~~e~--~~~~~~~l~~~~~~~vi~ 306 (335)
T Consensus 164 ~~l~~l~~~~~~l~~~~~~~~~~~~~~~~e~~~~l~~l~llt~KP~lyvaN~~e~~~~~~n~~~~~i~~~~~~~~~~vv~ 243 (372)
T COG0012 164 EELSLLGKLEEHLEEGKPARGLDLSKWSEEDLEALASLNLLTAKPMLYVANVSEDDLANLNEYVKRLKELAAKENAEVVP 243 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99998887899998200220277445899999998876564049869999777654311169999999976650895999
Q ss_pred EECCCCCCHHHHHH
Q ss_conf 98887889999999
Q gi|254780648|r 307 FSSITGHGIPQILE 320 (335)
Q Consensus 307 ISA~tg~GI~eL~~ 320 (335)
T Consensus 244 ~sA~~E~eL~~l~~ 257 (372)
T COG0012 244 VSAAIELELRELAD 257 (372)
T ss_pred EEHHHHHHHHHCCC
T ss_conf 41899999985746