HHsearch alignment for GI: 254780648 and conserved domain: COG0378

>COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification, protein turnover, chaperones / Transcription].

Probab=98.21  E-value=3.5e-06  Score=57.31  Aligned_cols=76  Identities=9%  Similarity=0.067  Sum_probs=48.6

Q ss_pred             HHHHHCCCCCCC--HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH--HHHHHHHHHHCC-CCEEEEECCCCC
Q ss_conf             887520222211--013466678998777667505988999974658998899--999999998629-948999888788
Q gi|254780648|r  239 VLLHIVSALEEN--VQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL--ARKKNELATQCG-QVPFEFSSITGH  313 (335)
Q Consensus       239 vLl~VVD~s~~d--~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~--~~~~~~l~~~~~-~~vi~ISA~tg~  313 (335)
T Consensus       120 ~~v~VidvteGe~~P~K~g-----------P~i~~-aDllVInK~DLa~~v~~dlevm~~da~~~np~~~ii~~n~ktg~  187 (202)
T COG0378         120 LRVVVIDVTEGEDIPRKGG-----------PGIFK-ADLLVINKTDLAPYVGADLEVMARDAKEVNPEAPIIFTNLKTGE  187 (202)
T ss_pred             EEEEEEECCCCCCCCCCCC-----------CCEEE-EEEEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf             6999998788888765579-----------96467-41899856773877286699999999984999988998478786


Q ss_pred             CHHHHHHHHHHHH
Q ss_conf             9999999999999
Q gi|254780648|r  314 GIPQILECLHDKI  326 (335)
Q Consensus       314 GI~eL~~~I~e~L  326 (335)
T Consensus       188 G~~~~~~~i~~~~  200 (202)
T COG0378         188 GLDEWLRFIEPQA  200 (202)
T ss_pred             CHHHHHHHHHHHC
T ss_conf             8999999987640