HHsearch alignment for GI: 254780648 and conserved domain: COG0486

>COG0486 ThdF Predicted GTPase [General function prediction only].
Probab=99.93  E-value=1.8e-26  Score=180.35  Aligned_cols=158  Identities=23%  Similarity=0.199  Sum_probs=123.2

Q ss_pred             CEEEEECCCCCCCEEEEEECCCCCH-HHHHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCCCCHHH-HHHHHHHHH
Q ss_conf             1124421677753035410145401-21211000000102663298689982264212473116775123-443333357
Q gi|254780648|r  161 DIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDR-FLKHTERTH  238 (335)
Q Consensus       161 DVglVG~PNaGKSTLln~ls~ak~k-Ia~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~glG~~-FLrhIer~~  238 (335)
T Consensus       219 kvvIiG~PNvGKSSLLNaL~~~d~AIVTdI~GTTRDviee~i~i~G~pv~l~DTAGiRet~d~VE~iGIeRs~~~i~~AD  298 (454)
T COG0486         219 KVVIIGRPNVGKSSLLNALLGRDRAIVTDIAGTTRDVIEEDINLNGIPVRLVDTAGIRETDDVVERIGIERAKKAIEEAD  298 (454)
T ss_pred             EEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf             49998799886799999886678667428999741037899998988999985677666734899999999999998599


Q ss_pred             HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH
Q ss_conf             88752022221101346667899877766750598899997465899889999999999862994899988878899999
Q gi|254780648|r  239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI  318 (335)
Q Consensus       239 vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~~~~vi~ISA~tg~GI~eL  318 (335)
T Consensus       299 lvL~v~D~~~~~~~~d~~~~~-------~~~~~~~~i~v~NK~DL~~~~~~~~~----~~~~~~~~i~iSa~t~~Gl~~L  367 (454)
T COG0486         299 LVLFVLDASQPLDKEDLALIE-------LLPKKKPIIVVLNKADLVSKIELESE----KLANGDAIISISAKTGEGLDAL  367 (454)
T ss_pred             EEEEEEECCCCCCHHHHHHHH-------HCCCCCCEEEEEECHHCCCCCCCCHH----HCCCCCCEEEEEECCCCCHHHH
T ss_conf             899997088777601177887-------24368977999960211564321012----0267882699982576579999


Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999999854
Q gi|254780648|r  319 LECLHDKIFSI  329 (335)
Q Consensus       319 ~~~I~e~L~~~  329 (335)
T Consensus       368 ~~~i~~~~~~~  378 (454)
T COG0486         368 REAIKQLFGKG  378 (454)
T ss_pred             HHHHHHHHHHC
T ss_conf             99999998630