HHsearch alignment for GI: 254780648 and conserved domain: COG0486
>COG0486 ThdF Predicted GTPase [General function prediction only].
Probab=99.93 E-value=1.8e-26 Score=180.35 Aligned_cols=158 Identities=23% Similarity=0.199 Sum_probs=123.2
Q ss_pred CEEEEECCCCCCCEEEEEECCCCCH-HHHHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCCCCHHH-HHHHHHHHH
Q ss_conf 1124421677753035410145401-21211000000102663298689982264212473116775123-443333357
Q gi|254780648|r 161 DIGIIGLPNAGKSTFLASVTRAKPK-IADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDR-FLKHTERTH 238 (335)
Q Consensus 161 DVglVG~PNaGKSTLln~ls~ak~k-Ia~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~glG~~-FLrhIer~~ 238 (335)
T Consensus 219 kvvIiG~PNvGKSSLLNaL~~~d~AIVTdI~GTTRDviee~i~i~G~pv~l~DTAGiRet~d~VE~iGIeRs~~~i~~AD 298 (454)
T COG0486 219 KVVIIGRPNVGKSSLLNALLGRDRAIVTDIAGTTRDVIEEDINLNGIPVRLVDTAGIRETDDVVERIGIERAKKAIEEAD 298 (454)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 49998799886799999886678667428999741037899998988999985677666734899999999999998599
Q ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH
Q ss_conf 88752022221101346667899877766750598899997465899889999999999862994899988878899999
Q gi|254780648|r 239 VLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQI 318 (335)
Q Consensus 239 vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~~~~vi~ISA~tg~GI~eL 318 (335)
T Consensus 299 lvL~v~D~~~~~~~~d~~~~~-------~~~~~~~~i~v~NK~DL~~~~~~~~~----~~~~~~~~i~iSa~t~~Gl~~L 367 (454)
T COG0486 299 LVLFVLDASQPLDKEDLALIE-------LLPKKKPIIVVLNKADLVSKIELESE----KLANGDAIISISAKTGEGLDAL 367 (454)
T ss_pred EEEEEEECCCCCCHHHHHHHH-------HCCCCCCEEEEEECHHCCCCCCCCHH----HCCCCCCEEEEEECCCCCHHHH
T ss_conf 899997088777601177887-------24368977999960211564321012----0267882699982576579999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999854
Q gi|254780648|r 319 LECLHDKIFSI 329 (335)
Q Consensus 319 ~~~I~e~L~~~ 329 (335)
T Consensus 368 ~~~i~~~~~~~ 378 (454)
T COG0486 368 REAIKQLFGKG 378 (454)
T ss_pred HHHHHHHHHHC
T ss_conf 99999998630