HHsearch alignment for GI: 254780648 and conserved domain: COG1100

>COG1100 GTPase SAR1 and related small G proteins [General function prediction only].
Probab=99.18  E-value=2.3e-11  Score=88.70  Aligned_cols=158  Identities=19%  Similarity=0.164  Sum_probs=96.2

Q ss_pred             ECEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEEC---CEEEEEECCCCCCCCCCCCCCCHHHHHH--HH
Q ss_conf             011244216777530354101454012121100000010266329---8689982264212473116775123443--33
Q gi|254780648|r  160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG---YKEFILADIPGIIKNAHQGAGIGDRFLK--HT  234 (335)
Q Consensus       160 aDVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~---~~~~~i~D~PGlIegA~~~~glG~~FLr--hI  234 (335)
T Consensus         6 ~kivv~G~~g~GKTtl~~~l~~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~Dt~gq~~~---------~~~~~~y~   75 (219)
T COG1100           6 FKIVVLGDGGVGKTTLLNRLVGDEFP-EGYPPTIGNLDPAKTIEPYRRNIKLQLWDTAGQEEY---------RSLRPEYY   75 (219)
T ss_pred             EEEEEECCCCCCHHHHHHHHHCCCCC-CCCCCCEEECCCCCEEECCCCCEEEEEEECCCHHHH---------HHHHHHCC
T ss_conf             79999999999889999999647676-556761454043203622666002676767986999---------99887504


Q ss_pred             HHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH-------------HHH---
Q ss_conf             33578875202222-1101346667899877766750598899997465899889999999-------------999---
Q gi|254780648|r  235 ERTHVLLHIVSALE-ENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKN-------------ELA---  297 (335)
Q Consensus       235 er~~vLl~VVD~s~-~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~-------------~l~---  297 (335)
T Consensus        76 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~l~~~~~--~~~~iilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (219)
T COG1100          76 RGANGILIVYDSTLRESSDELTEEWLEELRELAP--DDVPILLVGNKIDLFDEQSSSEEILNQLNREVVLLVLAPKAVLP  153 (219)
T ss_pred             CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCC--CCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHH
T ss_conf             3897899999762056578899999999987466--88679996976105543013678877532453000222344423


Q ss_pred             HHCCCCEEEEECC--CCCCHHHHHHHHHHHHHHH
Q ss_conf             8629948999888--7889999999999999854
Q gi|254780648|r  298 TQCGQVPFEFSSI--TGHGIPQILECLHDKIFSI  329 (335)
Q Consensus       298 ~~~~~~vi~ISA~--tg~GI~eL~~~I~e~L~~~  329 (335)
T Consensus       154 ~~~~~~~~~~s~~~~~~~~v~~~~~~~~~~~~~~  187 (219)
T COG1100         154 EVANPALLETSAKSLTGPNVNELFKELLRKLLEE  187 (219)
T ss_pred             HHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf             3200044324210167878789999999999886