HHsearch alignment for GI: 254780648 and conserved domain: COG3276
>COG3276 SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis].
Probab=99.07 E-value=1.6e-09 Score=77.62 Aligned_cols=149 Identities=22% Similarity=0.221 Sum_probs=97.1
Q ss_pred EEEEECCCCCCCEEEEEECCCCCHHHH---HHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHH----
Q ss_conf 124421677753035410145401212---1100000010266329868998226421247311677512344333----
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAKPKIAD---YPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGAGIGDRFLKHT---- 234 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls~ak~kIa~---ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~glG~~FLrhI---- 234 (335)
T Consensus 3 i~t~GhidHgkT~L~~altg~~~d~l~EekKRG~TiDlg~~y~~~~d~~~~fIDvpgh-----~------~~i~~miag~ 71 (447)
T COG3276 3 IGTAGHIDHGKTTLLKALTGGVTDRLPEEKKRGITIDLGFYYRKLEDGVMGFIDVPGH-----P------DFISNLLAGL 71 (447)
T ss_pred EEEEEEEECCCHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCEEEEECCCC-----H------HHHHHHHHHH
T ss_conf 9974002014302233302553320545661584684205732577773688618984-----7------8899998540
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCE-EEEEECCCCCCHHHHHHHHHHHHHHCC---CCEEEEECC
Q ss_conf 3357887520222211013466678998777667505988-999974658998899999999998629---948999888
Q gi|254780648|r 235 ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIE-IVGLSQIDTVDSDTLARKKNELATQCG---QVPFEFSSI 310 (335)
Q Consensus 235 er~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~-IIVlNKiDl~~~e~~~~~~~~l~~~~~---~~vi~ISA~ 310 (335)
T Consensus 72 ~~~d~alLvV~~deGl~~qtgEhL----~i--Ldllgi~~giivltk~D~~d~~r~e~~i~~Il~~l~l~~~~i~~~s~~ 145 (447)
T COG3276 72 GGIDYALLVVAADEGLMAQTGEHL----LI--LDLLGIKNGIIVLTKADRVDEARIEQKIKQILADLSLANAKIFKTSAK 145 (447)
T ss_pred CCCCEEEEEEECCCCCCHHHHHHH----HH--HHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 577458999847557664368899----99--986198732899962234467889999999986502000323011012
Q ss_pred CCCCHHHHHHHHHHHHH
Q ss_conf 78899999999999998
Q gi|254780648|r 311 TGHGIPQILECLHDKIF 327 (335)
Q Consensus 311 tg~GI~eL~~~I~e~L~ 327 (335)
T Consensus 146 ~g~Gi~~Lk~~l~~L~~ 162 (447)
T COG3276 146 TGRGIEELKNELIDLLE 162 (447)
T ss_pred CCCCHHHHHHHHHHHHH
T ss_conf 57877999999987520