HHsearch alignment for GI: 254780648 and conserved domain: COG5256
>COG5256 TEF1 Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis].
Probab=99.15 E-value=1.3e-10 Score=84.08 Aligned_cols=149 Identities=21% Similarity=0.265 Sum_probs=84.1
Q ss_pred ECEEEEECCCCCCCEEEEEEC---CCC-C-------HH------HHHH--------------HCCCEECCEEEEECCEEE
Q ss_conf 011244216777530354101---454-0-------12------1211--------------000000102663298689
Q gi|254780648|r 160 ADIGIIGLPNAGKSTFLASVT---RAK-P-------KI------ADYP--------------FTTLYPNLGIVKEGYKEF 208 (335)
Q Consensus 160 aDVglVG~PNaGKSTLln~ls---~ak-~-------kI------a~yp--------------FTT~~P~lGvv~~~~~~~ 208 (335)
T Consensus 8 ~nl~~iGHVD~GKSTl~GrLly~~G~id~~tmeK~~~ea~~~gK~sf~fawvlD~tkeERerGvTi~~~~~~fet~k~~~ 87 (428)
T COG5256 8 LNLVFIGHVDAGKSTLVGRLLYDLGEIDKRTMEKLEKEAKELGKESFKFAWVLDKTKEERERGVTIDVAHSKFETDKYNF 87 (428)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHCCEEEEEEEEEEECCCCEE
T ss_conf 28999837878703445565777379798999999999986197716899985388667866668997778864377058
Q ss_pred EEECCCCCCCCCCCCCCCHHHHHH-H---HHHHHHHHHHCCCCCCCHHHHH--HHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 982264212473116775123443-3---3335788752022221101346--667899877766750598899997465
Q gi|254780648|r 209 ILADIPGIIKNAHQGAGIGDRFLK-H---TERTHVLLHIVSALEENVQAAY--QCILDELSAYNSELRKKIEIVGLSQID 282 (335)
Q Consensus 209 ~i~D~PGlIegA~~~~glG~~FLr-h---Ier~~vLl~VVD~s~~d~~~~~--~~I~~EL~~y~~~L~~Kp~IIVlNKiD 282 (335)
T Consensus 88 tIiDaPGH-----------rdFvknmItGasqAD~aVLVV~a~~~efE~g~~~~gQtrEH~~La~tlGi~~lIVavNKMD 156 (428)
T COG5256 88 TIIDAPGH-----------RDFVKNMITGASQADVAVLVVDARDGEFEAGFGVGGQTREHAFLARTLGIKQLIVAVNKMD 156 (428)
T ss_pred EEEECCCH-----------HHHHHHHHCCHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCC
T ss_conf 99607846-----------7789876313313367999998889831014365875167899998569756999997156
Q ss_pred CCC--HHHHHHHHHH---HHHHCCC-----CEEEEECCCCCCHHHHH
Q ss_conf 899--8899999999---9986299-----48999888788999999
Q gi|254780648|r 283 TVD--SDTLARKKNE---LATQCGQ-----VPFEFSSITGHGIPQIL 319 (335)
Q Consensus 283 l~~--~e~~~~~~~~---l~~~~~~-----~vi~ISA~tg~GI~eL~ 319 (335)
T Consensus 157 ~v~wde~rf~ei~~~v~~l~k~~G~~~~~v~FIPiSg~~G~Nl~~~s 203 (428)
T COG5256 157 LVSWDEERFEEIVSEVSKLLKMVGYNPKDVPFIPISGFKGDNLTKKS 203 (428)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
T ss_conf 66627999999999999999971998667707962244677633267