HHsearch alignment for GI: 254780648 and conserved domain: KOG3883

Probab=98.04  E-value=1.1e-05  Score=54.19  Aligned_cols=161  Identities=12%  Similarity=0.208  Sum_probs=107.6

Q ss_pred             EEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEEC-----CEEEEEC---CEEEEEECCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             124421677753035410145401212110000001-----0266329---86899822642124731167751234433
Q gi|254780648|r  162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPN-----LGIVKEG---YKEFILADIPGIIKNAHQGAGIGDRFLKH  233 (335)
Q Consensus       162 VglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~-----lGvv~~~---~~~~~i~D~PGlIegA~~~~glG~~FLrh  233 (335)
T Consensus        12 VvVcG~k~VGKTaileQl~yg~~----~~~~e~~pTiEDiY~~svet~rgarE~l~lyDTaGlq~~~~e---L----prh   80 (198)
T KOG3883          12 VVVCGMKSVGKTAILEQLLYGNH----VPGTELHPTIEDIYVASVETDRGAREQLRLYDTAGLQGGQQE---L----PRH   80 (198)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCC----CCCCCCCCCHHHHEEEEEECCCCHHHEEEEEECCCCCCCHHH---H----HHH
T ss_conf             99977745228999999985167----889766663442246764068781016888652445576002---0----276


Q ss_pred             -HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH-HHHHHHHHHHCCCCEEEEECCC
Q ss_conf             -33357887520222211013466678998777667505988999974658998899-9999999986299489998887
Q gi|254780648|r  234 -TERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTL-ARKKNELATQCGQVPFEFSSIT  311 (335)
Q Consensus       234 -Ier~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~-~~~~~~l~~~~~~~vi~ISA~t  311 (335)
T Consensus        81 y~q~aDafVLVYs~~d~eSf~rv~llKk~Idk~-KdKKEvpiVVLaN~rdr~~p~~vd~d~A~~Wa~rEkvkl~eVta~d  159 (198)
T KOG3883          81 YFQFADAFVLVYSPMDPESFQRVELLKKEIDKH-KDKKEVPIVVLANKRDRAEPREVDMDVAQIWAKREKVKLWEVTAMD  159 (198)
T ss_pred             HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHC-CCCCCCCEEEEECHHHCCCCHHCCHHHHHHHHHHHHEEEEEEEECC
T ss_conf             710576579996379988988999999998625-5655122899730010136401278899888765302478987134


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf             88999999999999985452303
Q gi|254780648|r  312 GHGIPQILECLHDKIFSIRGENE  334 (335)
Q Consensus       312 g~GI~eL~~~I~e~L~~~r~e~E  334 (335)
T Consensus       160 R~sL~epf~~l~~rl~~pqskS~  182 (198)
T KOG3883         160 RPSLYEPFTYLASRLHQPQSKST  182 (198)
T ss_pred             CHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             42245389999875058754455