HHsearch alignment for GI: 254780648 and conserved domain: PRK01889

>PRK01889 ribosome-associated GTPase; Reviewed.

Probab=97.42  E-value=8.9e-05  Score=48.77  Aligned_cols=53  Identities=15%  Similarity=0.251  Sum_probs=38.0

Q ss_pred             CCCCEEEEEECCCCCCH-HHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf             05988999974658998-89999999999862994899988878899999999999
Q gi|254780648|r  270 RKKIEIVGLSQIDTVDS-DTLARKKNELATQCGQVPFEFSSITGHGIPQILECLHD  324 (335)
Q Consensus       270 ~~Kp~IIVlNKiDl~~~-e~~~~~~~~l~~~~~~~vi~ISA~tg~GI~eL~~~I~e  324 (335)
T Consensus       140 ~g~~pvivLnK~DL~~d~~~~~~~~~~~--~~g~~v~~vSa~~~~gl~~L~~~l~~  193 (353)
T PRK01889        140 SGAEPVVVLTKADLCEDVEEKIAEVEAL--APGVPVLAVNALDGEGVDALQAWLKP  193 (353)
T ss_pred             CCCCEEEEEECCCCCCCHHHHHHHHHHH--CCCCEEEEEECCCCCCHHHHHHHHHC
T ss_conf             6996799996655667999999999985--59975999978998478999998634