HHsearch alignment for GI: 254780648 and conserved domain: PRK04004
>PRK04004 translation initiation factor IF-2; Validated.
Probab=99.43 E-value=1.1e-12 Score=96.61 Aligned_cols=143 Identities=22% Similarity=0.333 Sum_probs=88.3
Q ss_pred EEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEEC--------------------CEEEEEECCCCCCCCCC
Q ss_conf 1244216777530354101454012121100000010266329--------------------86899822642124731
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG--------------------YKEFILADIPGIIKNAH 221 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~--------------------~~~~~i~D~PGlIegA~ 221 (335)
T Consensus 8 vtimGHVDhGKTsLLD~iR~t~--V~~~EaGGITQhIGA~~v~~~~~~~~~~~~~~~~~~~~~ipgllfiDTPG-----H 80 (592)
T PRK04004 8 VVVLGHVDHGKTTLLDKIRGTA--VAAKEAGGITQHIGATEVPIDVIEKIAGPLVKRLPLKLKIPGLLFIDTPG-----H 80 (592)
T ss_pred EEEECCCCCCHHHHHHHHHCCC--CCCCCCCCCCCEECEEEECCCCHHHHCCCCCCCCCCCCCCCCCEEECCCC-----H
T ss_conf 9997873777636899986287--73555776232306598412310110344334433234567755765996-----5
Q ss_pred CCCCCHHHH--HHH--HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC------------
Q ss_conf 167751234--433--3335788752022221101346667899877766750598899997465899------------
Q gi|254780648|r 222 QGAGIGDRF--LKH--TERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD------------ 285 (335)
Q Consensus 222 ~~~glG~~F--Lrh--Ier~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~------------ 285 (335)
T Consensus 81 e------aFt~mR~RGa~vtDiaILVVa~~dGv~pQT~EaI~~-~k~-----~~vP~IVAiNKiDr~~gw~~~~~~~~~~ 148 (592)
T PRK04004 81 E------AFSNLRKRGGALADIAILVVDINEGFQPQTIESLNI-LKS-----RKTPFVVAANKIDRIPGWKSVEGAPFLE 148 (592)
T ss_pred H------HHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHH-HHH-----CCCCEEEEEECCCCCCCCCCCCCCCHHH
T ss_conf 9------999999736745788999997788867627999999-997-----5998899986223566677676741123
Q ss_pred ------H---HHHH----HHHHHHHHHC----------C----CCEEEEECCCCCCHHHHHHHHH
Q ss_conf ------8---8999----9999999862----------9----9489998887889999999999
Q gi|254780648|r 286 ------S---DTLA----RKKNELATQC----------G----QVPFEFSSITGHGIPQILECLH 323 (335)
Q Consensus 286 ------~---e~~~----~~~~~l~~~~----------~----~~vi~ISA~tg~GI~eL~~~I~ 323 (335)
T Consensus 149 ~~~~q~~~v~~~l~~~~~~vi~~l~e~G~~~e~~~~~~d~g~~v~~VpvSA~tGeGi~dLL~~i~ 213 (592)
T PRK04004 149 SFKKQSERVQAELEEKLYELIGELYELGFSADRFDRVSDFTKTVAIVPVSAKTGEGIPDLLMVLA 213 (592)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf 22317388999998888888899987287632214543458814899782056899899999999