HHsearch alignment for GI: 254780648 and conserved domain: PRK04004

>PRK04004 translation initiation factor IF-2; Validated.
Probab=99.43  E-value=1.1e-12  Score=96.61  Aligned_cols=143  Identities=22%  Similarity=0.333  Sum_probs=88.3

Q ss_pred             EEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEEC--------------------CEEEEEECCCCCCCCCC
Q ss_conf             1244216777530354101454012121100000010266329--------------------86899822642124731
Q gi|254780648|r  162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKEG--------------------YKEFILADIPGIIKNAH  221 (335)
Q Consensus       162 VglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~~--------------------~~~~~i~D~PGlIegA~  221 (335)
T Consensus         8 vtimGHVDhGKTsLLD~iR~t~--V~~~EaGGITQhIGA~~v~~~~~~~~~~~~~~~~~~~~~ipgllfiDTPG-----H   80 (592)
T PRK04004          8 VVVLGHVDHGKTTLLDKIRGTA--VAAKEAGGITQHIGATEVPIDVIEKIAGPLVKRLPLKLKIPGLLFIDTPG-----H   80 (592)
T ss_pred             EEEECCCCCCHHHHHHHHHCCC--CCCCCCCCCCCEECEEEECCCCHHHHCCCCCCCCCCCCCCCCCEEECCCC-----H
T ss_conf             9997873777636899986287--73555776232306598412310110344334433234567755765996-----5


Q ss_pred             CCCCCHHHH--HHH--HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC------------
Q ss_conf             167751234--433--3335788752022221101346667899877766750598899997465899------------
Q gi|254780648|r  222 QGAGIGDRF--LKH--TERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVD------------  285 (335)
Q Consensus       222 ~~~glG~~F--Lrh--Ier~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~------------  285 (335)
T Consensus        81 e------aFt~mR~RGa~vtDiaILVVa~~dGv~pQT~EaI~~-~k~-----~~vP~IVAiNKiDr~~gw~~~~~~~~~~  148 (592)
T PRK04004         81 E------AFSNLRKRGGALADIAILVVDINEGFQPQTIESLNI-LKS-----RKTPFVVAANKIDRIPGWKSVEGAPFLE  148 (592)
T ss_pred             H------HHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHH-HHH-----CCCCEEEEEECCCCCCCCCCCCCCCHHH
T ss_conf             9------999999736745788999997788867627999999-997-----5998899986223566677676741123


Q ss_pred             ------H---HHHH----HHHHHHHHHC----------C----CCEEEEECCCCCCHHHHHHHHH
Q ss_conf             ------8---8999----9999999862----------9----9489998887889999999999
Q gi|254780648|r  286 ------S---DTLA----RKKNELATQC----------G----QVPFEFSSITGHGIPQILECLH  323 (335)
Q Consensus       286 ------~---e~~~----~~~~~l~~~~----------~----~~vi~ISA~tg~GI~eL~~~I~  323 (335)
T Consensus       149 ~~~~q~~~v~~~l~~~~~~vi~~l~e~G~~~e~~~~~~d~g~~v~~VpvSA~tGeGi~dLL~~i~  213 (592)
T PRK04004        149 SFKKQSERVQAELEEKLYELIGELYELGFSADRFDRVSDFTKTVAIVPVSAKTGEGIPDLLMVLA  213 (592)
T ss_pred             HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHH
T ss_conf             22317388999998888888899987287632214543458814899782056899899999999