HHsearch alignment for GI: 254780648 and conserved domain: PRK05306
>PRK05306 infB translation initiation factor IF-2; Validated.
Probab=99.48 E-value=1.6e-13 Score=101.76 Aligned_cols=149 Identities=23% Similarity=0.392 Sum_probs=103.0
Q ss_pred EEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEE--E-CCEEEEEECCCCCCCCCCCCCCCHHHHHH----HH
Q ss_conf 12442167775303541014540121211000000102663--2-98689982264212473116775123443----33
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVK--E-GYKEFILADIPGIIKNAHQGAGIGDRFLK----HT 234 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~--~-~~~~~~i~D~PGlIegA~~~~glG~~FLr----hI 234 (335)
T Consensus 344 vt~mghvdhgkt~lld~~r~~~--v~~~e~ggitq~iga~~v~~~~~~~itf~dtpg-----h~------af~~mr~rga 410 (839)
T PRK05306 344 VTIMGHVDHGKTSLLDAIRKTK--VAAGEAGGITQHIGAYQVETENGKKITFLDTPG-----HE------AFTAMRARGA 410 (839)
T ss_pred EEEECCCCCCHHHHHHHHHCCC--CCCCCCCCCCCEEEEEEEEECCCCEEEEECCCC-----HH------HHHHHHHCCC
T ss_conf 9885774677314899986287--535567875522234999956998799855885-----58------8999986357
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC------C--CCEEE
Q ss_conf 335788752022221101346667899877766750598899997465899889999999999862------9--94899
Q gi|254780648|r 235 ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC------G--QVPFE 306 (335)
Q Consensus 235 er~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~------~--~~vi~ 306 (335)
T Consensus 411 ~~tdi~ilvvaaddgv~pqt~eai~~------~~~a~vp~ivaink~d~~~a~-~~~v~~~l~~~~~~~e~~gg~~~~v~ 483 (839)
T PRK05306 411 QVTDIVVLVVAADDGVMPQTIEAINH------AKAAGVPIIVAINKIDKPGAN-PDRVKQELTEYGLVPEEWGGDTIFVP 483 (839)
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHH------HHHCCCCEEEEEECCCCCCCC-HHHHHHHHHHCCCCHHHCCCCEEEEE
T ss_conf 65436999997777756778999999------997499889997404678898-89999999984986454289448998
Q ss_pred EECCCCCCHHHHHHHHH--HHHHHHH
Q ss_conf 98887889999999999--9998545
Q gi|254780648|r 307 FSSITGHGIPQILECLH--DKIFSIR 330 (335)
Q Consensus 307 ISA~tg~GI~eL~~~I~--e~L~~~r 330 (335)
T Consensus 484 ~sa~~~~~~~~l~e~i~l~ae~~~l~ 509 (839)
T PRK05306 484 VSAKTGEGIDELLEAILLQAEVLELK 509 (839)
T ss_pred EEECCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 15157887899999999876652044