HHsearch alignment for GI: 254780648 and conserved domain: PRK10512

>PRK10512 selenocysteinyl-tRNA-specific translation factor; Provisional.
Probab=99.45  E-value=3.6e-13  Score=99.70  Aligned_cols=149  Identities=19%  Similarity=0.252  Sum_probs=97.5

Q ss_pred             EEEEECCCCCCCEEEEEECCCCCHH-HH--HHHCCCEECCEEEE---ECCEEEEEECCCCCCCCCCCCCCCHHHHHHHH-
Q ss_conf             1244216777530354101454012-12--11000000102663---29868998226421247311677512344333-
Q gi|254780648|r  162 IGIIGLPNAGKSTFLASVTRAKPKI-AD--YPFTTLYPNLGIVK---EGYKEFILADIPGIIKNAHQGAGIGDRFLKHT-  234 (335)
Q Consensus       162 VglVG~PNaGKSTLln~ls~ak~kI-a~--ypFTT~~P~lGvv~---~~~~~~~i~D~PGlIegA~~~~glG~~FLrhI-  234 (335)
T Consensus         3 igTAGHVDHGKTsLvkALTG~dtDRL~EEk~RGiTId--LGFA~~~l~~g~~~g~VDVPG-----HE------rFIknMl   69 (615)
T PRK10512          3 IATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTID--LGYAYWPQPDGRVLGFIDVPG-----HE------KFLSNML   69 (615)
T ss_pred             EEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHCCEEE--ECEEEEECCCCCEEEEEECCC-----HH------HHHHHHH
T ss_conf             9963654778999999986888656977897187277--130755579997899987998-----38------9999997


Q ss_pred             ---HHHHHHHHHCCCCCC---CHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC------CC
Q ss_conf             ---335788752022221---101346667899877766750598899997465899889999999999862------99
Q gi|254780648|r  235 ---ERTHVLLHIVSALEE---NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQC------GQ  302 (335)
Q Consensus       235 ---er~~vLl~VVD~s~~---d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~------~~  302 (335)
T Consensus        70 AG~~gid~vlLVVAAdeGvMPQT~EHl~Il~--------lLgi~~giV~lTK~Dlvd~e~l~~v~~ei~~~l~~t~l~~~  141 (615)
T PRK10512         70 AGVGGIDHALLVVACDDGVMAQTREHLAILQ--------LTGNPMLTVALTKADRVDEARIDEVRRQVLEVLREYGFAEA  141 (615)
T ss_pred             HHHHHCCEEEEEEECCCCCCCCHHHHHHHHH--------HHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             4464378899999889987723799999999--------81998289999776568979999999999999844787679


Q ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             48999888788999999999999985452
Q gi|254780648|r  303 VPFEFSSITGHGIPQILECLHDKIFSIRG  331 (335)
Q Consensus       303 ~vi~ISA~tg~GI~eL~~~I~e~L~~~r~  331 (335)
T Consensus       142 pi~~vSa~tg~Gi~~L~~~L~~l~~~~~~  170 (615)
T PRK10512        142 KLFVTAATEGRGIDALREHLLQLPEREHA  170 (615)
T ss_pred             CEEECCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf             75201456667999999999862556667