HHsearch alignment for GI: 254780648 and conserved domain: PRK12289
>PRK12289 ribosome-associated GTPase; Reviewed.
Probab=96.78 E-value=0.00056 Score=43.92 Aligned_cols=83 Identities=20% Similarity=0.199 Sum_probs=55.3
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
Q ss_conf 78875202222110134666789987776675059889999746589988999999999986299489998887889999
Q gi|254780648|r 238 HVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSITGHGIPQ 317 (335)
Q Consensus 238 ~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~~~~vi~ISA~tg~GI~e 317 (335)
T Consensus 90 Dq~liV~s~~~P~~--~~~~LDRfLv~--ae~~~i~~vivlnK~DL~~~~e~~~~~~~~-~~~GY~~i~iS~~~~~gl~~ 164 (351)
T PRK12289 90 DQILLVFALAEPPL--DPWQLSRFLVK--AESTGLEIQLCLNKADLVSPTQQQQWQDRL-AQWGYQPLFISVEQGIGLEA 164 (351)
T ss_pred CEEEEEEECCCCCC--CHHHHHHHHHH--HHHCCCCEEEEEEHHHCCCHHHHHHHHHHH-HHCCCCEEEEECCCCCCHHH
T ss_conf 35999996578998--87799999999--998799789998657749989999999999-97798289996789968999
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780648|r 318 ILECLHDK 325 (335)
Q Consensus 318 L~~~I~e~ 325 (335)
T Consensus 165 L~~~L~~k 172 (351)
T PRK12289 165 LLKQLRNK 172 (351)
T ss_pred HHHHHCCC
T ss_conf 99987598