HHsearch alignment for GI: 254780648 and conserved domain: PRK12317
>PRK12317 elongation factor 1-alpha; Reviewed.
Probab=99.29 E-value=1.4e-11 Score=90.06 Aligned_cols=142 Identities=20% Similarity=0.311 Sum_probs=83.4
Q ss_pred CEEEEECCCCCCCEEEEEEC---CCC-C-----------HHH----HHHH------------CCCEECCEEEEECCEEEE
Q ss_conf 11244216777530354101---454-0-----------121----2110------------000001026632986899
Q gi|254780648|r 161 DIGIIGLPNAGKSTFLASVT---RAK-P-----------KIA----DYPF------------TTLYPNLGIVKEGYKEFI 209 (335)
Q Consensus 161 DVglVG~PNaGKSTLln~ls---~ak-~-----------kIa----~ypF------------TT~~P~lGvv~~~~~~~~ 209 (335)
T Consensus 9 ~i~~~GhVD~GKSTL~G~Ll~~~g~~~~~~~~~~~~~~~~~g~~s~~~a~~~D~~~eEr~rGiTid~~~~~f~~~~~~~~ 88 (426)
T PRK12317 9 NLAVIGHVDHGKSTLVGRLLYETGAVDEHIIEEYEEEAKKKGKESFKFAWVMDRLKEERERGVTIDLAHKKFETDKYYFT 88 (426)
T ss_pred EEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHCCCEEEEEEEEEECCCCEEE
T ss_conf 99999522876888876898772994489999999899864877521432125786687558278831699954981699
Q ss_pred EECCCCCCCCCCCCCCCHHHHHHHH----HHHHHHHHHCCCCCC-CHHHHHHHHHHHHHHHHHHHCCCC-EEEEEECCCC
Q ss_conf 8226421247311677512344333----335788752022221-101346667899877766750598-8999974658
Q gi|254780648|r 210 LADIPGIIKNAHQGAGIGDRFLKHT----ERTHVLLHIVSALEE-NVQAAYQCILDELSAYNSELRKKI-EIVGLSQIDT 283 (335)
Q Consensus 210 i~D~PGlIegA~~~~glG~~FLrhI----er~~vLl~VVD~s~~-d~~~~~~~I~~EL~~y~~~L~~Kp-~IIVlNKiDl 283 (335)
T Consensus 89 iiD~PG-----H~------~fi~nmi~Gas~~D~ailvV~A~~~~G~~~Q---T~eHl~l--~~~lgi~~iiV~vnKmD~ 152 (426)
T PRK12317 89 IIDCPG-----HR------DFVKNMITGASQADAAVLVVSARDAGGVMPQ---TREHVFL--ARTLGINQLIVAINKMDA 152 (426)
T ss_pred EEECCC-----CH------HHHHHHHHHHCCCCEEEEEEECCCCCCCCHH---HHHHHHH--HHHHCCCEEEEEEECCCC
T ss_conf 987896-----36------6787787453467727999963656676477---8999999--998099839999953335
Q ss_pred CC--HHHHHHHHHHHH---HHCC-----CCEEEEECCCCCCHHHH
Q ss_conf 99--889999999999---8629-----94899988878899999
Q gi|254780648|r 284 VD--SDTLARKKNELA---TQCG-----QVPFEFSSITGHGIPQI 318 (335)
Q Consensus 284 ~~--~e~~~~~~~~l~---~~~~-----~~vi~ISA~tg~GI~eL 318 (335)
T Consensus 153 v~~~~~~~~~i~~~~~~~l~~~g~~~~~i~~iPiSa~~Gdni~~~ 197 (426)
T PRK12317 153 VNYDEKRYNEVKEEVSKLLKMVGYKPDDIPFIPVSAFEGDNVVKK 197 (426)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC
T ss_conf 677889999999999999997098803470887532346564116