HHsearch alignment for GI: 254780648 and conserved domain: PRK12724

Probab=95.22  E-value=0.044  Score=32.44  Aligned_cols=140  Identities=23%  Similarity=0.307  Sum_probs=62.4

Q ss_pred             EEEEECCCCCCCEEEEEECCC-----CCHHH----------H------------HHHCCCEE---CCEEEEECCEEEEEE
Q ss_conf             124421677753035410145-----40121----------2------------11000000---102663298689982
Q gi|254780648|r  162 IGIIGLPNAGKSTFLASVTRA-----KPKIA----------D------------YPFTTLYP---NLGIVKEGYKEFILA  211 (335)
Q Consensus       162 VglVG~PNaGKSTLln~ls~a-----k~kIa----------~------------ypFTT~~P---~lGvv~~~~~~~~i~  211 (335)
T Consensus       226 i~lVGPTGVGKTTTiAKLAA~~~l~~~kkVaLIT~DTYRIgAvEQLktYa~Il~iPv~vv~~~~el~~al~~~~~DlILI  305 (432)
T PRK12724        226 VFFVGPTGSGKTTSIAKLAAKYFLHMGKSVSLYTTDNYRIAAIEQLKRYADTMGMPFYPVKDIKKFKETLARDGSELILI  305 (432)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCEEEE
T ss_conf             99989999888999999999999974992799952665377999999999985994599518999999998569999999


Q ss_pred             CCCCCCCCCCCCCC-C--HHHHHHHH-HHHHHHH-HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
Q ss_conf             26421247311677-5--12344333-3357887-520222211013466678998777667505988999974658998
Q gi|254780648|r  212 DIPGIIKNAHQGAG-I--GDRFLKHT-ERTHVLL-HIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS  286 (335)
Q Consensus       212 D~PGlIegA~~~~g-l--G~~FLrhI-er~~vLl-~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~  286 (335)
T Consensus       306 DTAGr---S~rd~~~~~eL~~ll~~~~~~~~ie~~LVLSaTtk-----~~dl~~ii~~f~~--l-~~~~lIfTKLDET~s  374 (432)
T PRK12724        306 DTAGY---SHRNLEQLERMQSFYSCFGEKDSVENLLVLSSTSS-----YHHTLTVLKAYES--L-NYRRILLTKLDEADF  374 (432)
T ss_pred             ECCCC---CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC-----HHHHHHHHHHHCC--C-CCCEEEEEECCCCCC
T ss_conf             29998---97899999999999986366788517999978899-----8999999998426--9-998499971227798


Q ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCCCCHHH
Q ss_conf             8999999999986299489998887889999
Q gi|254780648|r  287 DTLARKKNELATQCGQVPFEFSSITGHGIPQ  317 (335)
Q Consensus       287 e~~~~~~~~l~~~~~~~vi~ISA~tg~GI~e  317 (335)
T Consensus       375 --~G~iln-i~~~~~~PisYiT--~GQ~VPd  400 (432)
T PRK12724        375 --LGSFLE-LADTYSKSFTYLS--VGQEVPF  400 (432)
T ss_pred             --CCHHHH-HHHHHCCCEEEEE--CCCCCCC
T ss_conf             --669999-9999889869980--8997971