HHsearch alignment for GI: 254780648 and conserved domain: PRK12736
>PRK12736 elongation factor Tu; Reviewed.
Probab=99.19 E-value=8.5e-11 Score=85.27 Aligned_cols=149 Identities=19% Similarity=0.284 Sum_probs=85.6
Q ss_pred ECEEEEECCCCCCCEEEEEECCCCC-----HHHHHHH-----------CCCEECCEEEEECCEEEEEECCCCCCCCCCCC
Q ss_conf 0112442167775303541014540-----1212110-----------00000102663298689982264212473116
Q gi|254780648|r 160 ADIGIIGLPNAGKSTFLASVTRAKP-----KIADYPF-----------TTLYPNLGIVKEGYKEFILADIPGIIKNAHQG 223 (335)
Q Consensus 160 aDVglVG~PNaGKSTLln~ls~ak~-----kIa~ypF-----------TT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~ 223 (335)
T Consensus 13 ~ni~~~GHVD~GKSTL~g~L~~~~~~~~~~~~~~~~~~D~~~eEr~rGiTid~~~~~~~t~~~~~~~iD~PG-----H~- 86 (394)
T PRK12736 13 VNIGTIGHVDHGKTTLTAAITKVLAERGLAQAKDYASIDAAPEEKARGITINTAHVEYETEKRHYAHVDCPG-----HA- 86 (394)
T ss_pred EEEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCCEEEEEEEEEECCCEEEEEEECCC-----CH-
T ss_conf 499999512884898998975045450651022223311665562478217841899972883699988897-----25-
Q ss_pred CCCHHHHHHHH----HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-EEEEEECCCCCCHHHHHHHHH----
Q ss_conf 77512344333----335788752022221101346667899877766750598-899997465899889999999----
Q gi|254780648|r 224 AGIGDRFLKHT----ERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKI-EIVGLSQIDTVDSDTLARKKN---- 294 (335)
Q Consensus 224 ~glG~~FLrhI----er~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp-~IIVlNKiDl~~~e~~~~~~~---- 294 (335)
T Consensus 87 -----~fi~nmi~Ga~~~D~alLVV~A~~G-~~~---QT~EHl~l--~~~lgv~~~IV~vnK~D~v~~~~~~~~v~~~i~ 155 (394)
T PRK12736 87 -----DYVKNMITGAAQMDGAILVVAATDG-PMP---QTREHILL--ARQVGVPYIVVFLNKVDLVDDEELLELVEMEVR 155 (394)
T ss_pred -----HHHCCEEEEECCCCEEEEEEECCCC-CHH---HHHHHHHH--HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf -----4311044435346658999985877-467---79999999--998299915999988789983999999999999
Q ss_pred HHHHHCC-----CCEEEEECCCCC--------CHHHHHHHHHHH
Q ss_conf 9998629-----948999888788--------999999999999
Q gi|254780648|r 295 ELATQCG-----QVPFEFSSITGH--------GIPQILECLHDK 325 (335)
Q Consensus 295 ~l~~~~~-----~~vi~ISA~tg~--------GI~eL~~~I~e~ 325 (335)
T Consensus 156 ~~l~~~g~~~~~ip~i~~s~~~~~~~~~~~~~~i~~Ll~~ld~~ 199 (394)
T PRK12736 156 ELLSEYDFPGDDIPVIRGSALKALEGDPKWEDAIMELMDAVDEY 199 (394)
T ss_pred HHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99987699912060998454361368873577899999999852