HHsearch alignment for GI: 254780648 and conserved domain: TIGR00991
>TIGR00991 3a0901s02IAP34 GTP-binding protein; InterPro: IPR005688 Two integral outer envelope GTPases, Toc34 and Toc86, are proposed to regulate the recognition and translocation of nuclear-encoded preproteins during the early stages of protein import into chloroplasts.. The cytosolic region of Toc34 reveals 34% alpha-helical and 260eta-strand structure and is stabilized by intramolecular electrostatic interaction. Toc34 binds both chloroplast preproteins and isolated transit peptides in a guanosine triphosphate- (GTP-) dependent mechanism . ; GO: 0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity, 0006886 intracellular protein transport, 0009707 chloroplast outer membrane.
Probab=97.15 E-value=0.00022 Score=46.40 Aligned_cols=121 Identities=22% Similarity=0.300 Sum_probs=70.9
Q ss_pred EEEEECCCCCCCEEEEEECCCCC-HHHHHHHCCCEECCEEEEECCEEEEEECCCCCCCCCCCCC---CCHHHHHHHHHH-
Q ss_conf 12442167775303541014540-1212110000001026632986899822642124731167---751234433333-
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAKP-KIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKNAHQGA---GIGDRFLKHTER- 236 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls~ak~-kIa~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIegA~~~~---glG~~FLrhIer- 236 (335)
T Consensus 42 ~lvmGkGGvGksstvn~~~Ge~~~~~s~fqseG~rP~~~sr~r~GftlniidtPGlieGGy~n~~a~~iik~fl--l~~t 119 (328)
T TIGR00991 42 ILVMGKGGVGKSSTVNSIIGERVAAVSAFQSEGLRPVLVSRTRAGFTLNIIDTPGLIEGGYINDQAVNIIKRFL--LDKT 119 (328)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH--HHHH
T ss_conf 88860687663101223332023200000025886326651246615775327861015303378999999988--5312
Q ss_pred HHHHHHH--CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
Q ss_conf 5788752--0222211013466678998777667505988999974658998
Q gi|254780648|r 237 THVLLHI--VSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDS 286 (335)
Q Consensus 237 ~~vLl~V--VD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~ 286 (335)
T Consensus 120 idvllyvdrld~yr~d~ld~-~v~~ait~~fGk~iW~~~-~~~lthaq~sPP 169 (328)
T TIGR00991 120 IDVLLYVDRLDAYRVDDLDK-QVVKAITDSFGKEIWKKS-LVVLTHAQLSPP 169 (328)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHCCCCC
T ss_conf 12210012332354546889-999999876427788778-887653105888