HHsearch alignment for GI: 254780648 and conserved domain: TIGR01393
>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297 LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu. Two types of phylogenetic tree, rooted by other GTP-binding proteins, suggest that eukaryotic homologs (including GUF1 of yeast) originated within the bacterial LepA family. The function of the proteins in this family are unknown. ; GO: 0005525 GTP binding.
Probab=99.20 E-value=2.6e-11 Score=88.42 Aligned_cols=108 Identities=26% Similarity=0.309 Sum_probs=71.1
Q ss_pred EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEE-EEECCCCC
Q ss_conf 68998226421247311677512344333335788752022221101346667899877766750598899-99746589
Q gi|254780648|r 206 KEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIV-GLSQIDTV 284 (335)
Q Consensus 206 ~~~~i~D~PGlIegA~~~~glG~~FLrhIer~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~II-VlNKiDl~ 284 (335)
T Consensus 71 Y~LNLIDTPGHVDF-------sYEVSRSLAACEGALL~VDA~QG--vEA-QT~aN~YlAlE~dL----eIIPViNKIDLP 136 (598)
T TIGR01393 71 YVLNLIDTPGHVDF-------SYEVSRSLAACEGALLLVDAAQG--VEA-QTLANVYLALENDL----EIIPVINKIDLP 136 (598)
T ss_pred EEEEEECCCCCCCC-------CHHHHHHHHHHCCEEEEEECCCC--HHH-HHHHHHHHHHHCCC----EEEEEECCCCCC
T ss_conf 89964528897212-------73788888871640356141032--358-88999988756187----584778253688
Q ss_pred CHHHHHHHHHHHHHHCCC---CEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 988999999999986299---48999888788999999999999985
Q gi|254780648|r 285 DSDTLARKKNELATQCGQ---VPFEFSSITGHGIPQILECLHDKIFS 328 (335)
Q Consensus 285 ~~e~~~~~~~~l~~~~~~---~vi~ISA~tg~GI~eL~~~I~e~L~~ 328 (335)
T Consensus 137 ~Ad-pe~v~~eIe~~iGld~~~ai~~SAKtG~Gi~e~LEaIv~~vPp 182 (598)
T TIGR01393 137 SAD-PERVKKEIEEVIGLDASEAILASAKTGIGIEEILEAIVKRVPP 182 (598)
T ss_pred CCC-HHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 888-5899998765418896430387503678889998897101810