HHsearch alignment for GI: 254780648 and conserved domain: TIGR02858

>TIGR02858 spore_III_AA stage III sporulation protein AA; InterPro: IPR014217 Proteins in this entry include the stage III sporulation protein AA that is encoded by one of several genes in the spoIIIA locus. This protein is only found in species that are capable of endospore formation..
Probab=95.63  E-value=0.04  Score=32.69  Aligned_cols=23  Identities=35%  Similarity=0.535  Sum_probs=19.1

Q ss_pred             ECEEEEECCCCCCCEEEEEECCC
Q ss_conf             01124421677753035410145
Q gi|254780648|r  160 ADIGIIGLPNAGKSTFLASVTRA  182 (335)
Q Consensus       160 aDVglVG~PNaGKSTLln~ls~a  182 (335)
T Consensus       124 ~NTLiIsPPq~GKTTlLRDlaR~  146 (282)
T TIGR02858       124 LNTLIISPPQCGKTTLLRDLARI  146 (282)
T ss_pred             EEEEEECCCCCCCCCHHHHHHHH
T ss_conf             67888868898851048889888