HHsearch alignment for GI: 254780648 and conserved domain: TIGR03596
>TIGR03596 GTPase_YlqF ribosome biogenesis GTP-binding protein YlqF. Members of this protein family are GTP-binding proteins involved in ribosome biogenesis, including the essential YlqF protein of Bacillus subtilis, which is an essential protein. They are related to Era, EngA, and other GTPases of ribosome biogenesis, but are circularly permuted. This family is not universal, and is not present in Escherichia coli, and so is not as well studied as some other GTPases. This model is built for bacterial members.
Probab=99.22 E-value=2.5e-12 Score=94.59 Aligned_cols=55 Identities=33% Similarity=0.474 Sum_probs=44.9
Q ss_pred EEEEECCCCCCCEEEEEECCCC-CHHHHHHHCCCEECCEEEEECCEEEEEECCCCCCCC
Q ss_conf 1244216777530354101454-012121100000010266329868998226421247
Q gi|254780648|r 162 IGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGIIKN 219 (335)
Q Consensus 162 VglVG~PNaGKSTLln~ls~ak-~kIa~ypFTT~~P~lGvv~~~~~~~~i~D~PGlIeg 219 (335)
T Consensus 121 v~vVG~PNVGKSSlIN~L~~~k~~~v~~~PG~Tr~~q--~i~l~-~~i~llDtPGvl~P 176 (276)
T TIGR03596 121 AMIVGIPNVGKSTLINRLAGKKVAKVGNRPGVTKGQQ--WIKLS-DGLELLDTPGILWP 176 (276)
T ss_pred EEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEE--EEEEC-CCEEEECCCCCCCC
T ss_conf 9997279875899999873672587779654210258--99957-97799668874578