HHsearch alignment for GI: 254780648 and conserved domain: cd00066

>cd00066 G-alpha G protein alpha subunit. The alpha subunit of G proteins contains the guanine nucleotide binding site. The heterotrimeric GNP-binding proteins are signal transducers that communicate signals from many hormones, neurotransmitters, chemokines, and autocrine and paracrine factors. Extracellular signals are received by receptors, which activate the G proteins, which in turn route the signals to several distinct intracellular signaling pathways. The alpha subunit of G proteins is a weak GTPase. In the resting state, heterotrimeric G proteins are associated at the cytosolic face of the plasma membrane and the alpha subunit binds to GDP. Upon activation by a receptor GDP is replaced with GTP, and the G-alpha/GTP complex dissociates from the beta and gamma subunits. This results in activation of downstream signaling pathways, such as cAMP synthesis by adenylyl cyclase, which is terminated when GTP is hydrolized and the heterotrimers reconstitute.
Probab=97.06  E-value=0.0021  Score=40.42  Aligned_cols=130  Identities=13%  Similarity=0.149  Sum_probs=77.9

Q ss_pred             CEECCEEEE----ECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCH--HHH--HHHHHHHHHHH
Q ss_conf             000102663----2986899822642124731167751234433333578875202222110--134--66678998777
Q gi|254780648|r  194 LYPNLGIVK----EGYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTHVLLHIVSALEENV--QAA--YQCILDELSAY  265 (335)
Q Consensus       194 ~~P~lGvv~----~~~~~~~i~D~PGlIegA~~~~glG~~FLrhIer~~vLl~VVD~s~~d~--~~~--~~~I~~EL~~y  265 (335)
T Consensus       145 R~~TtGI~e~~F~~~~~~~~~~DVGGQ---rseRkKWi~~----Fe~V~aiiFvvsLs~yDq~l~Ed~~~Nrl~eSl~LF  217 (317)
T cd00066         145 RVKTTGIVETKFTIKNLKFRMFDVGGQ---RSERKKWIHC----FEDVTAIIFVVALSEYDQVLFEDESTNRMQESLNLF  217 (317)
T ss_pred             HCCCCCCEEEEEEECCEEEEEECCCCC---CCCCCCHHHH----HCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             356788316999977767998516888---4434346888----467766998852353233555664517899999999


Q ss_pred             H-----HHHCCCCEEEEEECCCCCCHHH------------------HHHH----HHHHHHHC---CCC--EEEEECCCCC
Q ss_conf             6-----6750598899997465899889------------------9999----99999862---994--8999888788
Q gi|254780648|r  266 N-----SELRKKIEIVGLSQIDTVDSDT------------------LARK----KNELATQC---GQV--PFEFSSITGH  313 (335)
Q Consensus       266 ~-----~~L~~Kp~IIVlNKiDl~~~e~------------------~~~~----~~~l~~~~---~~~--vi~ISA~tg~  313 (335)
T Consensus       218 ~~i~n~~~f~~~~iiLflNK~Dlf~eKi~~~~l~~~Fpdy~g~~~~~~~a~~fi~~kF~~~~~~~~r~~y~h~T~A~Dt~  297 (317)
T cd00066         218 DSICNSRWFANTSIILFLNKKDLFEEKIKKSPLTDYFPDYTGPPNDYEEAAKFIRKKFLDLNRNPNKEIYPHFTCATDTE  297 (317)
T ss_pred             HHHHCCHHHCCCCEEEEEECHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEECHH
T ss_conf             99974874557988999857699998647995442288999999999999999999999853689985778756110528


Q ss_pred             CHHHHHHHHHHHHHHHH
Q ss_conf             99999999999998545
Q gi|254780648|r  314 GIPQILECLHDKIFSIR  330 (335)
Q Consensus       314 GI~eL~~~I~e~L~~~r  330 (335)
T Consensus       298 ~i~~vf~~v~d~I~~~~  314 (317)
T cd00066         298 NIRFVFDAVKDIILQNN  314 (317)
T ss_pred             HHHHHHHHHHHHHHHHH
T ss_conf             99999999999999987