HHsearch alignment for GI: 254780648 and conserved domain: cd01855
>cd01855 YqeH YqeH. YqeH is an essential GTP-binding protein. Depletion of YqeH induces an excess initiation of DNA replication, suggesting that it negatively controls initiation of chromosome replication. The YqeH subfamily is common in eukaryotes and sporadically present in bacteria with probable acquisition by plants from chloroplasts. Proteins of the YqeH family contain all sequence motifs typical of the vast class of P-loop-containing GTPases, but show a circular permutation, with a G4-G1-G3 pattern of motifs as opposed to the regular G1-G3-G4 pattern seen in most GTPases.
Probab=99.04 E-value=2.6e-11 Score=88.35 Aligned_cols=52 Identities=33% Similarity=0.387 Sum_probs=34.1
Q ss_pred CEEEEECCCCCCCEEEEEECC---------CCCHHHHHHHCCCEECCEEEEEC-CEEEEEECCCCC
Q ss_conf 112442167775303541014---------54012121100000010266329-868998226421
Q gi|254780648|r 161 DIGIIGLPNAGKSTFLASVTR---------AKPKIADYPFTTLYPNLGIVKEG-YKEFILADIPGI 216 (335)
Q Consensus 161 DVglVG~PNaGKSTLln~ls~---------ak~kIa~ypFTT~~P~lGvv~~~-~~~~~i~D~PGl 216 (335)
T Consensus 129 ~vyvvG~~NvGKSTLiN~Ll~~~~~~~~~~~~~t~S~~PGTTl~~----i~~~l~~~~~l~DtPGi 190 (190)
T cd01855 129 DVYVVGATNVGKSTLINALLKKDNGKKKLKDLLTTSPIPGTTLDL----IKIPLGNGKKLYDTPGI 190 (190)
T ss_pred CEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCC----EEEECCCCCEEEECCCC
T ss_conf 579980587546799999863023443456640667999731652----58973999999959599