HHsearch alignment for GI: 254780648 and conserved domain: cd01859
>cd01859 MJ1464 MJ1464. This family represents archaeal GTPase typified by the protein MJ1464 from Methanococcus jannaschii. The members of this family show a circular permutation of the GTPase signature motifs so that C-terminal strands 5, 6, and 7 (strands 6 contain the NKxD motif) are relocated to the N terminus.
Probab=99.19 E-value=3.3e-12 Score=93.87 Aligned_cols=53 Identities=28% Similarity=0.501 Sum_probs=40.6
Q ss_pred CEEEEECCCCCCCEEEEEECCCC-CHHHHHHHCCCEECCEEEEECCEEEEEECCCCC
Q ss_conf 11244216777530354101454-012121100000010266329868998226421
Q gi|254780648|r 161 DIGIIGLPNAGKSTFLASVTRAK-PKIADYPFTTLYPNLGIVKEGYKEFILADIPGI 216 (335)
Q Consensus 161 DVglVG~PNaGKSTLln~ls~ak-~kIa~ypFTT~~P~lGvv~~~~~~~~i~D~PGl 216 (335)
T Consensus 103 ~v~ivG~PNVGKSTLIN~L~~~~~~~v~~~pGtTr~~~--~i~~-~~~~~liDTpGi 156 (156)
T cd01859 103 KVGVVGYPNVGKSSIINALKGRHSASTSPSPGYTKGEQ--LVKI-TSKIYLLDTPGV 156 (156)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCEEEECCCCCEECCEE--EEEE-CCCEEEEECCCC
T ss_conf 89998147845989999974881377759998070559--9997-998899989099