HHsearch alignment for GI: 254780648 and conserved domain: cd01859
>cd01859 MJ1464 MJ1464. This family represents archaeal GTPase typified by the protein MJ1464 from Methanococcus jannaschii. The members of this family show a circular permutation of the GTPase signature motifs so that C-terminal strands 5, 6, and 7 (strands 6 contain the NKxD motif) are relocated to the N terminus.
Probab=98.98 E-value=1.7e-09 Score=77.32 Aligned_cols=90 Identities=13% Similarity=0.128 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 33333578875202222110134666789987776675059889999746589988999999999986299489998887
Q gi|254780648|r 232 KHTERTHVLLHIVSALEENVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQCGQVPFEFSSIT 311 (335)
Q Consensus 232 rhIer~~vLl~VVD~s~~d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~~~~~vi~ISA~t 311 (335)
T Consensus 8 ~~i~~~D~il~VvDar~p~~~~~~-~l~~~l~~-----~~K~~ilvlNK~Dl~~~~~~~~~~~-~~~~~g~~~i~iSa~~ 80 (156)
T cd01859 8 RIIKESDVVLEVLDARDPELTRSR-KLERYVLE-----LGKKLLIVLNKADLVPKEVLEKWKS-IKESEGIPVVYVSAKE 80 (156)
T ss_pred HHHHHCCEEEEEEECCCCCCCCCH-HHHHHHHH-----CCCCEEEEEECCCCCCHHHHHHHHH-HHHCCCCCEEEEECCC
T ss_conf 999879999999987889998698-99999975-----6993999977555589899999999-9828999737870126
Q ss_pred CCCHHHHHHHHHHHHHH
Q ss_conf 88999999999999985
Q gi|254780648|r 312 GHGIPQILECLHDKIFS 328 (335)
Q Consensus 312 g~GI~eL~~~I~e~L~~ 328 (335)
T Consensus 81 ~~g~~~L~~~i~~~~~~ 97 (156)
T cd01859 81 RLGTKILRRTIKELAKI 97 (156)
T ss_pred CCCHHHHHHHHHHHHCC
T ss_conf 75799999999986023