HHsearch alignment for GI: 254780648 and conserved domain: cd01898
>cd01898 Obg Obg subfamily. The Obg nucleotide binding protein subfamily has been implicated in stress response, chromosome partitioning, replication initiation, mycelium development, and sporulation. Obg proteins are among a large group of GTP binding proteins conserved from bacteria to humans. The E. coli homolog, ObgE is believed to function in ribosomal biogenesis. Members of the subfamily contain two equally and highly conserved domains, a C-terminal GTP binding domain and an N-terminal glycine-rich domain.
Probab=100.00 E-value=0 Score=321.74 Aligned_cols=167 Identities=47% Similarity=0.816 Sum_probs=153.8
Q ss_pred ECEEEEECCCCCCCEEEEEECCCCCHHHHHHHCCCEECCEEEEE-CCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 01124421677753035410145401212110000001026632-98689982264212473116775123443333357
Q gi|254780648|r 160 ADIGIIGLPNAGKSTFLASVTRAKPKIADYPFTTLYPNLGIVKE-GYKEFILADIPGIIKNAHQGAGIGDRFLKHTERTH 238 (335)
Q Consensus 160 aDVglVG~PNaGKSTLln~ls~ak~kIa~ypFTT~~P~lGvv~~-~~~~~~i~D~PGlIegA~~~~glG~~FLrhIer~~ 238 (335)
T Consensus 1 ~~VAiiG~pNvGKSTLlN~l~~~~~~V~~~pgTT~~~~~g~i~~~~~~~i~~~DtpGi~~~~~~~~~l~~~~l~~i~~ad 80 (170)
T cd01898 1 ADVGLVGLPNAGKSTLLSAISNAKPKIADYPFTTLVPNLGVVRVDDGRSFVVADIPGLIEGASEGKGLGHRFLRHIERTR 80 (170)
T ss_pred CCEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCCC
T ss_conf 95899899999899999999678760325666523744779993698569996488644455466224899986133456
Q ss_pred HHHHHCCCCCC-CHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHH-CCCCEEEEECCCCCCHH
Q ss_conf 88752022221-10134666789987776675059889999746589988999999999986-29948999888788999
Q gi|254780648|r 239 VLLHIVSALEE-NVQAAYQCILDELSAYNSELRKKIEIVGLSQIDTVDSDTLARKKNELATQ-CGQVPFEFSSITGHGIP 316 (335)
Q Consensus 239 vLl~VVD~s~~-d~~~~~~~I~~EL~~y~~~L~~Kp~IIVlNKiDl~~~e~~~~~~~~l~~~-~~~~vi~ISA~tg~GI~ 316 (335)
T Consensus 81 vil~vvD~~~~~~~~~~~~~i~~~l~~~~~~~~~kp~ilv~NK~Dl~~~~~~~~~~~~~~~~~~~~~vi~iSA~~g~gi~ 160 (170)
T cd01898 81 LLLHVIDLSGDDDPVEDYKTIRNELELYNPELLEKPRIVVLNKIDLLDEEELFELLKELLKELWGKPVFPISALTGEGLD 160 (170)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHCCCCEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHH
T ss_conf 17999989987898999999999999827444038650677620242835638999999985699958999754797999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780648|r 317 QILECLHDKI 326 (335)
Q Consensus 317 eL~~~I~e~L 326 (335)
T Consensus 161 ~L~~~I~~~L 170 (170)
T cd01898 161 ELLRKLAELL 170 (170)
T ss_pred HHHHHHHHHC
T ss_conf 9999999669